Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0683 |
Symbol | |
ID | 7086881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 822419 |
End bp | 824413 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643459595 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002356625 |
Protein GI | 217971874 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACTC AGTTCGCGCG CACATTAGCT ATTTTACGGC AACGAACTCG CTCAACCGTT GCTAAGGTTC TGTTGATCAT CAGCATGTTT ATCGGGATTT GTATCGCCCT CGTCGGCCTA GTGTATATTC AAGGCAATAT ATTTGATGGT GTACGCACCT ATGTCCGCGG TGAAGGCTTG TGGGCCAAGG CGCAAAAAGA TGCGGTACTT TATCTCACCC ATTACTCTTA TACCCAAAAT GATGTGGACT TTCAGCGTTA TCGTGCAGCG ACGAGCGTTA TGGAAGGTGA TCATCAAGCC AGGCAGGCCT TACTCGCAAC GCCAATCGAT GAACAGGCCG CCAAACAGGG TTTTATTCAG GGCCTCAATG ACGAACGCGA TACCGACTCA CTGATCTGGT TCTTCCGTCA CTTTCAATCC AATTCCTATA TGCGGCAAGC GATTCAGCTT TGGGGCTTAG CCGATCAACG CTTCGAGTTT GTAATGCAAC TCGCCGAGAA TATGCGTATT GAAATCAATC AACTGGGTGG CAGACCCGAA ATCCTCGCGC AATACCGCCA GCAATTGATT GATGTAAATG AAGAATTACT CAGCCTAGAA ATTGAATTTT CAGCTGTGCT CAGTGAAGGC GCACGTTGGG TCAAGCAAAT GACCTGGTTG ATTAGCCTTG GCGCCCTACT GCTGTTTATC AGTATTGGGA TATTCGCCAG TCGGCAGATC ATTCGTAACA TCGCCAAGTC TGAACGGCAG TTACTGATCA GTGAATCTCG CTTCACTAGC CTGAAAAACT CCGACACCAT AGGGATTATT TCATGGCAGC TCGATGGCAC CCTCCATGAT GCTAATGATC ATTTCCTCAA GATGCTCAAT TTTGACCGCG CGGATTTGAC CTCAAGCTTA ATCAACTGGC GCTCAATTAC CCCACCAGAA TATGAAACAC GAGATGCCAT TGCGATTGCA GAGTTAGAAC AGTTTGGCCA CTGCCAACAA TATGAAAAAC AACTTATCAG CAAGAGTGGT GCCTTAGTGC CTGTGATGTT AGCGGCCAGT TTTTTAAATG GCAGCAAATG TGAAGGCGTG GCTTACTTTA TGGATCTCAC CGCCAGTAAA CAGGCCGAAG ATAAACTCAG GCTCGCGGCA ACCGTGTTTA ATGCCAGCAC CGACGGCATA ATAATCACCG ATCCCCTGCT GAGTATTATT TCTATCAATC AAGCCTTTAC TCATATTACT GGCTTTACCC AGCAGGATTT GCACGGCGAT GCCAACCACT TCCTCAATGA CGGGCACAAT AGTGATGACG CCCGCCAAGC CATGCTAAAT CTGCTACAAC AGGGCGAGCA ATGGCAGGGG GAATTACTCA AACAAGTTAA ATCGGGCGAC TTACTGCCGC TCAGTGTGCG CATCAATACA GTGCGCAATG AGCATGACCG CCTGACTCAT TTTGTCATTG TGATTACCGA CATTGCCGAA CGCAAGGCAG AGGAGGAATA TCTGCGTCAT ATCGCCCATC ACGATGCCCT GACTAACCTG CCTAATCGTG TGTTATTCCA CACTAAACTT GAACAAGCCA TAGTGCACGC CCAACGGTCT GATGATATTT TTGCAATCCT TTTCTTAGAC TTAGATAACT TTAAGCCAGT GAATGACCAG TTTGGTCACG ATGTGGGAGA TAAACTATTA CAGGAAGTCG CGAAACGGCT TTCATCTGGG ATTCGCCAAA TGGATACCAT CACTCGCCTC GGAGGCGATG AGTTTGTGAT CCTGCTAGAA CACCTTGCCA ATACCCACAG AATCGGCCAA CTGATCCCTC AGATAAGCCA AGCTATTTGC GCGCCTTACA CTATCAATGG TCATCAAATT CATATCGGTG TCAGCGTCGG TTTGGCGATT TATCCAGAAA ACGGCACAGA TGCAAAAAGC CTGATCAATC ATGCTGATCA GGCCATGTAT TCGATGAAAA AAGCCAATAA GACTCACCTG CAAAGCCTAG GTTAA
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Protein sequence | MGTQFARTLA ILRQRTRSTV AKVLLIISMF IGICIALVGL VYIQGNIFDG VRTYVRGEGL WAKAQKDAVL YLTHYSYTQN DVDFQRYRAA TSVMEGDHQA RQALLATPID EQAAKQGFIQ GLNDERDTDS LIWFFRHFQS NSYMRQAIQL WGLADQRFEF VMQLAENMRI EINQLGGRPE ILAQYRQQLI DVNEELLSLE IEFSAVLSEG ARWVKQMTWL ISLGALLLFI SIGIFASRQI IRNIAKSERQ LLISESRFTS LKNSDTIGII SWQLDGTLHD ANDHFLKMLN FDRADLTSSL INWRSITPPE YETRDAIAIA ELEQFGHCQQ YEKQLISKSG ALVPVMLAAS FLNGSKCEGV AYFMDLTASK QAEDKLRLAA TVFNASTDGI IITDPLLSII SINQAFTHIT GFTQQDLHGD ANHFLNDGHN SDDARQAMLN LLQQGEQWQG ELLKQVKSGD LLPLSVRINT VRNEHDRLTH FVIVITDIAE RKAEEEYLRH IAHHDALTNL PNRVLFHTKL EQAIVHAQRS DDIFAILFLD LDNFKPVNDQ FGHDVGDKLL QEVAKRLSSG IRQMDTITRL GGDEFVILLE HLANTHRIGQ LIPQISQAIC APYTINGHQI HIGVSVGLAI YPENGTDAKS LINHADQAMY SMKKANKTHL QSLG
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