Gene Sbal223_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0650 
Symbol 
ID7089781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp781511 
End bp782743 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content48% 
IMG OID643459563 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002356593 
Protein GI217971842 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAC GAACGCTGTT TACACAAACG ATGTTTATAC AAAGAGTGAC TGAACGAGCA 
CGCAGTGCAT GCGATATTTC ATTAAAAAGC CCCCATCATC TCCCAAAGGC GCCCTTATTC
GCGCCTTTGA CGTTTCTACT GGCGAGTCTT TTCACTTTAA CCCCTATGGC TGTATTAGCG
GCGGACAAGG TCGACGTTAT CCCTGTGACG GTCGAGGCCA TTAAAGAAAC CTCCTTTGCC
GATGTCGTCA ATGAAGTCGG TAAAATTAAC GCCATCGATT CGGCGATACT CAACTTTAAC
GCCAGCGAAA AGATTAGCGC CATTCATTTT AGTAACGGCG ACAAAGTGAC GAAAGGCCAA
GTGATTGCCG AGCAAGATAA CACTAAGGCC AAGGCCGATT TAGACAAGGC TAAGAGCACC
TTAGCACTGG CGAAAACTAA GCTTGAGCGT ATTGAAGACC TGCTGATCAA AGAGCCATTC
GCACTCGCCA AGCAAGATGT AGATGAGCTG CGGGAAAATG TGAATCTGGC CGATGCCGAT
TTTCGCCAGA AACAAGCGAC CATGAACGAT TACTTGATCA AGGCGCCCTT CGATGGTCAG
CTAACAAGCT TTAGTCAGTC CATCGGCAGC CAAATTGGCG CAGGTACAGC CTTAGTCACT
CTCTATAGTT TAAATCCCGT CGAAGTCCGT TATGCCATTA GCCAGAACGA TTTTGGTAAG
GCGCAAAAAG GCCAGAAGGT AAATGTGACG GTCGAAGCTT ATGGCAATAA GGTGTTCAAA
GGATTAGTTA ACTATGTGGC TCCAGCGGTG GATGAAAGCT CAGGACGAGT CGAAGTGCAC
GCCGCCCTCG ACAACCCAGA GTTCAAACTA GCGCCCGGCA TGTTCGCCAA TATTAAGCAG
TTCTATAGCC GTGGGATTAA ACGCTTATTA GTGCCGCAAA ATTCGATTAT CGCCAATAAC
GACGAACGCT TTGTCTGGTT AGTGCGGGGC GATAGCGCTG TAAAACAAGT GGTTAAACTC
GCGCAAAACA CTAATGACGG TTATGCGGTC GTGACCGAAG GTTTAGCCGA AGGCGATCTA
GTGGTTAAGA CGGGCATGCA AAACCTCAAG TCCGATAGCA AGATCAAAGT CATTCAGGAT
AAAAATACGG CAGATAAAGC GGTAGCCCCC AGTTCCAACT CAGGTGCGGG CGCTACTCCA
AGTCCTGAAC CTAGCACTGA GGGGACCGAA TAA
 
Protein sequence
MFTRTLFTQT MFIQRVTERA RSACDISLKS PHHLPKAPLF APLTFLLASL FTLTPMAVLA 
ADKVDVIPVT VEAIKETSFA DVVNEVGKIN AIDSAILNFN ASEKISAIHF SNGDKVTKGQ
VIAEQDNTKA KADLDKAKST LALAKTKLER IEDLLIKEPF ALAKQDVDEL RENVNLADAD
FRQKQATMND YLIKAPFDGQ LTSFSQSIGS QIGAGTALVT LYSLNPVEVR YAISQNDFGK
AQKGQKVNVT VEAYGNKVFK GLVNYVAPAV DESSGRVEVH AALDNPEFKL APGMFANIKQ
FYSRGIKRLL VPQNSIIANN DERFVWLVRG DSAVKQVVKL AQNTNDGYAV VTEGLAEGDL
VVKTGMQNLK SDSKIKVIQD KNTADKAVAP SSNSGAGATP SPEPSTEGTE