Gene Sbal223_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0648 
Symbol 
ID7089779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp778189 
End bp779640 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content49% 
IMG OID643459561 
ProductMLTD_N domain protein 
Protein accessionYP_002356591 
Protein GI217971840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAC ATTTTCGCCA AACGCACTCT TTTACAGTGC TAATGCTGGC CATGTTCGTG 
GCCCAATTGA GCGGTTGCGC GACCACGTCG GCAAGTCCAT CGACCACAGA ATTCAGTGCC
CCAGCAAATG ATGTGAGTAA CGGTAGCGAC CACTCGCCAC AACACCAGCA GCACACGCCA
CCCGCTGTGG TTGAGCTGTA CAGCGACGTT TGGGAAAAGA TCCAACACGC CAATACCATT
GACGTACATG ACGATGCCGA AGTGCGCAAA CAGCGTAACT TTTTCGATGA TAAACAGAAG
TTTATGAATC AAGTCGGCGA ACGCGCCGAG CCCTTTTTGT ATTACATCGT CAGCCAGCTA
GAAGCCCGTA ACATGCCATT AGAATTGGCG TTATTGCCCA TAGTCGAAAG TGGTTACAAT
CCACTGGCGC AGGCAAATGG CCCAGCTGGA CTGTGGCAGA TGATCCCCGC CACAGGGCGT
AATTTTGGCT TAACGGTTAA CTCTGCCTAC GACGGTCGCA AAGATGCGCT GGCCTCAACC
GATGCCGTGC TCGACTATCT ACAGCATTTA TACGACACCT TAGATCACGA CTGGATCAAC
GCCGTCGCCG CCTACAATAC CGGTGAATTG GTGATTAAAG CCGCCATCGA CAAGAACAAA
GCCAAGGGTA AACCGACGGA CTTTTGGTCG CTGGGCATTC CGGCGAAACG CGTACAAACT
GTGCCTAAGT GGCTGGCGTT TATTCAAATT ATTCGCGCCC CTAATCATTA CAATCTAAAA
GTACGGCCGA TAGCTAACCG CCCTTTCTTG GATAGAGTAC CTGCGCCCAA TGGCGTGGAT
ATCGGCCAAA TCGCCAATGC GGCAGGGTTG AGCAAGGCAG AATTTAAAAC CTATAACCCT
GGCTTTCGCC AAGGCGTGAT CCCGAGCAAA GGCAAATATC AAATCGCCTT ACCGCTGGAA
AACATAGGTC AATATCAAGA AAATCACGAC AAACTCTACG CCCAAAAACG CTATGACAGC
CAAAGCTACA TAGTTAAATC TGGCGACAGC CTAGGCACAA TCGCGGCTAA GTTTGATACG
TCAGTCAAAG CATTAAAACA GGCTAATAAT CTGACCTCTG ACCGTCTCAA AGTCGGCCAA
GAGCTCACAC TATTAACGCC AATGGCAGCC AATGATAATG TGCCTGAACC CGCTAAAACC
AACACTAAGG CCGATAGCAA AGTCAGCAGC AAGTCATCAA CTAAAGCAAA CGCCAGTGGC
ACTAAAGCCA CCAGCTCAAA ATCGGCCGAC AAACCAGCGG CAAAAGCGAA AACCTACAAG
GTGAAATCCG GCGATTCACT GGATAAAATC GCCCGTAAGA ATAAGGTCAA ACTGGCTGAT
TTAATGAAGT GGAACCAGCT CAATGGCAAG AGCATTATTA AGCCAGGCCA AGAACTGAAA
ATCAGCGAAT AA
 
Protein sequence
MRKHFRQTHS FTVLMLAMFV AQLSGCATTS ASPSTTEFSA PANDVSNGSD HSPQHQQHTP 
PAVVELYSDV WEKIQHANTI DVHDDAEVRK QRNFFDDKQK FMNQVGERAE PFLYYIVSQL
EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTVNSAY DGRKDALAST
DAVLDYLQHL YDTLDHDWIN AVAAYNTGEL VIKAAIDKNK AKGKPTDFWS LGIPAKRVQT
VPKWLAFIQI IRAPNHYNLK VRPIANRPFL DRVPAPNGVD IGQIANAAGL SKAEFKTYNP
GFRQGVIPSK GKYQIALPLE NIGQYQENHD KLYAQKRYDS QSYIVKSGDS LGTIAAKFDT
SVKALKQANN LTSDRLKVGQ ELTLLTPMAA NDNVPEPAKT NTKADSKVSS KSSTKANASG
TKATSSKSAD KPAAKAKTYK VKSGDSLDKI ARKNKVKLAD LMKWNQLNGK SIIKPGQELK
ISE