| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0579 |
|---|
| Symbol | |
|---|
| ID | 7089310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 664058 |
|---|
| End bp | 665032 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643459506 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002356536 |
|---|
| Protein GI | 217971785 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCTTA GCCATAACGC CCCTCAGGCA AATAATCATG CTCAACTCGG GCTGCTCTTC
ATCTCAGTTG CGATTGTATT TTGGGGCATG TTACCCATAG CCTTGAAGCT TTCGGGCGCT
TTTATCGATC CTGTCACTTT GACTTGGTTT CGTTTTTTGG TCGCGCTTGT GGTTAGCATA
CTGATCCAAT GGAGCGCGGG CAGCCTTAAG CAATTTGCGG CGCTCGATGC CAAAGTCTGG
TTAAGGCTAG TACTTGCGGG CGTGTTTTTG ATGCTCAATT ATGTGTCTTT TGTTTACTCA
CTCGATTACC TCGCACCCGG CGCCGCCCAA CTTAATTTCC AGACTTCGCC CTTTTTCCTC
GCGTTTGGTG GTGTGTTGTT TTTTAAGGAA CGGCTGAATG CGGTGCAACT CAGCTGTTTT
GCAACCTTAG CTTTAGGTAT GTTGATGTTT TTCCATCCTA ATTTAAATTT TTCTGGGGCT
AATAATCATC AGGTTTGGAT TGGGGTGATG ATCATCCAGT TCTCGGCACT GTCGTGGACT
AGCTATGCCT TATTGCAAAA ATCCTTACTC AATCGTTTAT CGCCCGCGAA CGTGCTCTTA
GTGATCTATG GCTTAGGTAT TTTCGTAATG GCTCCCTTTA GCGACTTTAG TCAGTTTGTC
AGTATGGACA GCTTCGAGTG GCAGATTGCG CTGTTTTGCG CTGCCAATAC CTTGATCGCC
TATGGCTGTT TTGGGCAGTC GATGAAGTAC TGGCCGACGG CACAGGTGAG CGCCATGTTG
GCCCTAACGC CAGTATTTAG CTTTAGCGCC ACTGCTTTGG TAGTGAGCAT TGGCTGGTGG
CCAGAAGTCT TCCATGCCGA TGAATTAGAT GGATTATCTC TGCTGGGGAT TGGCGTCATT
ATTGTGTCTG TGATGGTGGT ACAATTACTG CCTCTGTATC GTAATCGTCA GGCGAAGCGT
TTGCAGGCTG CCTAA
|
|---|
| Protein sequence | MNLSHNAPQA NNHAQLGLLF ISVAIVFWGM LPIALKLSGA FIDPVTLTWF RFLVALVVSI
LIQWSAGSLK QFAALDAKVW LRLVLAGVFL MLNYVSFVYS LDYLAPGAAQ LNFQTSPFFL
AFGGVLFFKE RLNAVQLSCF ATLALGMLMF FHPNLNFSGA NNHQVWIGVM IIQFSALSWT
SYALLQKSLL NRLSPANVLL VIYGLGIFVM APFSDFSQFV SMDSFEWQIA LFCAANTLIA
YGCFGQSMKY WPTAQVSAML ALTPVFSFSA TALVVSIGWW PEVFHADELD GLSLLGIGVI
IVSVMVVQLL PLYRNRQAKR LQAA
|
|---|
| |