| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0530 |
|---|
| Symbol | |
|---|
| ID | 7089261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 607141 |
|---|
| End bp | 608562 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643459457 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_002356487 |
|---|
| Protein GI | 217971736 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.40399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAT CACGTGTGGC TTGGCTGTGT TTACTGCCCT TGCCTTGTTT ATTGCCTTTG
GCTGGCCATG CCCAGCCCAC GAGCTTCACC GACGCTTGGC AACAAGTGCT GAAGGTGAGC
GACAAGTTGC AAGCGCAATC CCAGGAAGTT AATCGCGCTA AAGGTGAAGA AGAGGCGGGC
GAGAGCTTAA ATCTGCCCTC CTTGAGCCTT AATGGCAGTT ATACCCACCT CGAAAAACCG
ATTGAACTGG ATCTTCGGGA TCTCAATCCC TTAGCCTCCC TTGATCCCGC GACGTTACCA
CCCGCCCTTG GCGGTGCTCT GGCGAGTATT CCGGGGTCAA TGTTTGTTAC GCCTTTTACT
GAGCAAGATA TCTTCCGCGC GAGCTTACAA GCCATGTGGC CGATTTATAC GGGCGGGCAG
ATCACCGCTG CCCAAGGTAT ACACGCGGCT ATGGTGGCTG AGAAGCAACA AGAATTACAG
CTTGCCACCC GTGATTTATT TACCCTGCTG GTGGACCGAT ATTACGCTGT CGATGTCACG
CTGGCATTGG TGAACACCCA AACCGATCTC GTTGGATCTT TAACTAAGCA TGTTGATCAT
GCGCTAGCGT TAGAGCGAGA AGGGCAAATC GCTAAGGTTG AGCGCCTCAA TGCGCAGGTC
GCCTTAGACA ATGCTAAAGT CAATTTAGGC AGCGCTCGCC GTCAACACGA AATGGCAGTT
ATTGCTCTGT CGCGCATGTT GCAGCAAAGC GATGTCGGTA CTGAGTCACC TCTATTTGTC
TTGCCGCATG CGCCGTCTTT AGGCCAGCTC ACCCAAGTGA CGCTGAGCCA ACATCCAGCG
CTTAAATTGC TCGAAGCGAA GGAAGCGCAG GCCAATGGCT TGGTTTCATT AGAACAGGGC
AAGTATTACC CCACAGTATT CCTCTTTGGT AATTACACAC TTTACGAAGA CGACAGCCTG
TTTTCTCAGG TAGAGCCTGA TTGGATGGTC GGTGTCGGCG TTAAAGTGCC CATTCTCAGC
CGCGACGGTC GCAGTGGTAA GGTCGAGGCC GCCAAGAGTG CACTTTTGCA GGCCCGTTAT
ACCAAGGCAC AAACGCGGCA AGATTTGAGT CTGTTACTGG ACCAAAGCTA TCGCCAATTA
TTACAGGCCG AAGAAGAAGT GACGGCGCTC GATACCTCAC TCGAACTCGC CACCGAAAAC
CTGCGCCTGC GGGAAATCGC CTTTAATCAA GGGCTTTCAA CTTCTATCGA CAGAGTCGAT
GCCGAGCTGA AACTCAGCGC AGTCAAAACT CAACAACTGG CCGCCCGTTA TCGTTATGTG
CAAGCCTATG CCAGATTAAT GGCCATCAGT GGTCAATTAG ATGAATTTAT CGGTCGTACC
ATAGCCCTTA CCCAAGTGCA GGAGACAAAC AATGCGCGCT AA
|
|---|
| Protein sequence | MKLSRVAWLC LLPLPCLLPL AGHAQPTSFT DAWQQVLKVS DKLQAQSQEV NRAKGEEEAG
ESLNLPSLSL NGSYTHLEKP IELDLRDLNP LASLDPATLP PALGGALASI PGSMFVTPFT
EQDIFRASLQ AMWPIYTGGQ ITAAQGIHAA MVAEKQQELQ LATRDLFTLL VDRYYAVDVT
LALVNTQTDL VGSLTKHVDH ALALEREGQI AKVERLNAQV ALDNAKVNLG SARRQHEMAV
IALSRMLQQS DVGTESPLFV LPHAPSLGQL TQVTLSQHPA LKLLEAKEAQ ANGLVSLEQG
KYYPTVFLFG NYTLYEDDSL FSQVEPDWMV GVGVKVPILS RDGRSGKVEA AKSALLQARY
TKAQTRQDLS LLLDQSYRQL LQAEEEVTAL DTSLELATEN LRLREIAFNQ GLSTSIDRVD
AELKLSAVKT QQLAARYRYV QAYARLMAIS GQLDEFIGRT IALTQVQETN NAR
|
|---|
| |