| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0524 |
|---|
| Symbol | |
|---|
| ID | 7089255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 597400 |
|---|
| End bp | 597888 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643459451 |
|---|
| Product | rod shape-determining protein MreD |
|---|
| Protein accession | YP_002356481 |
|---|
| Protein GI | 217971730 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2891] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.101318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.818556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTC AAGCCGCCAA TGGGCGCTTC ATTGTTTGGG TGACATTATT TATCGGCGTG
ATCAGCCAGA TCATGCCTTT GCCGAGTGTG GTCGATGCTT GGCGTCCCGA CTGGTTGTTG
ATGATTGTGC TCTACTGGTC TATCGCATTA CCCCATAGAT ACAACATCTT AACCGCTTGG
GTCTTAGGCT TAGTGTTAGA TATTTTATTG GGTGCCACCT TAGGTGTGCG CTCTTTAGCG
ATGTCTTTGG TGATTTATGT AGCCATCTTG CATTGCCAGC GATTGCGAAA TTTCCCTAAG
TGGCAACAGT CGTTGGTGAT CATGCTGCTC ATTTGTATGT ATCACTTAGT GATTTACTGG
GTCGAGTTTG TCATGCAAGA GGCGGTGTTC GATACGGATC TATTCTTACC TGCGATTTCA
GGATTAGTGA TCTGGCCTTG GATATTTTGG ATTCTACGTC GGGTTCGACG TCATTATAAG
GTTCGCTAA
|
|---|
| Protein sequence | MSFQAANGRF IVWVTLFIGV ISQIMPLPSV VDAWRPDWLL MIVLYWSIAL PHRYNILTAW
VLGLVLDILL GATLGVRSLA MSLVIYVAIL HCQRLRNFPK WQQSLVIMLL ICMYHLVIYW
VEFVMQEAVF DTDLFLPAIS GLVIWPWIFW ILRRVRRHYK VR
|
|---|
| |