Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0509 |
Symbol | |
ID | 7086985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 580224 |
End bp | 581132 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459436 |
Product | MSHA biogenesis protein MshM |
Protein accession | YP_002356466 |
Protein GI | 217971715 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCAGA AGCATTTTGG CCTAAGCCAA ACCCCATTTT CATTGACACC TAATACCGGA TTTTTTTTCG GCCTATCGCC ACACGTAGAA GCCTTGCAAG TGTTGCAAAC TGCGCTACAA ACGGGTGAGG GTTTTATCAA GGTGACAGGG GAAGTGGGGA CTGGTAAAAC TCTGATTTGC CGCAAGCTTA TCAATGAATT ACCGACTAAG TTCCATTGCG CCTATCTACC CAATCCTTAC CTTACGCCTG CAGAGTTACG CTGGGCGGTG GCGAGTGAGT TAGGCCTTAA ATACGCCAGC AATATCGACC AGCAGCAGCT CACTGGGCTT ATCCAGCAGC AGCTTTTAGC TTTGAGCGCC CATGGTCACG CCATCGTATT AGTGCTCGAT GAAGCGCAGG CATTGCCTGA CGACAGTTTA GAGGCGCTGC GGTTATTCAC TAATCTCGAA ACCGAGACGC GTAAGTTATT GCAGGTGGTG TTATTTGGGC AACCCGAACT TGATGAAAGA CTTAAACGCC AAGAATTCAG GCAATTAAGA CAACGTATTA CTTTTAGCTA CAACCTTCGC CCACTGACAT GGGATGAAAC CGATGCTTAT ATTCGTCACA GATTAGCCAT AGCAGGGCGT GCGGGCGAAC CACTCTTTAC ATCACGGGAA ACACGTCAGA TTGCCTATGC GTCCCGAGGG ATCCCCAGAT TGATCAATAT TCTTGCCCAC AAAGCCTTGT TACTGAGTTT CGGCGAGGGT GCTACGCGTG TGCAAACCTC CCACGTTAAG GCTGCGATTC AAGACACTGA AGATGCGAGC GTGCGCCGAT TATTGTCGTG GAAATGGCTG CCTTTTTTCA CTCTGATAAC TGTGGTGTTC GGTTTGGGAT TACAACACGT TTTGAGGAGT GTTGTATGA
|
Protein sequence | MYQKHFGLSQ TPFSLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIC RKLINELPTK FHCAYLPNPY LTPAELRWAV ASELGLKYAS NIDQQQLTGL IQQQLLALSA HGHAIVLVLD EAQALPDDSL EALRLFTNLE TETRKLLQVV LFGQPELDER LKRQEFRQLR QRITFSYNLR PLTWDETDAY IRHRLAIAGR AGEPLFTSRE TRQIAYASRG IPRLINILAH KALLLSFGEG ATRVQTSHVK AAIQDTEDAS VRRLLSWKWL PFFTLITVVF GLGLQHVLRS VV
|
| |