| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0503 |
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| Symbol | |
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| ID | 7086979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 573903 |
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| End bp | 575846 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643459430 |
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| Product | regulatory protein CsrD |
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| Protein accession | YP_002356460 |
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| Protein GI | 217971709 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CCCGAATGTT AACTACAAAA TTAACCAGCT TTTGGTTAAT GTCATTAGCC
GCTATTGCCT TCGTATTTTT GCTGAGCGCT ATGATGAGTT TCGTGCAGCT GACCTATAAA
TTTCAGCAGC AAAAAGTCGC CGAACTCGAA ACTATGTTAG TGGATCAATA TCAACACCAA
CCCTATTGGG ATTTGGAAGC TTGGCTGCCG CCCATGCTGC TCGCCTACAA TGCTGTTGAT
TTTCGGCTGA CCTTGAAAGA TGAAGTGATC TTTGCCTATG AAGGCAATCT CACTACGCAA
AATGCCATGG TGTATGACCA TGTGTTAGAT CCAAAATCTG GTCTGCGTAT GCAGCTGACC
TTGACCCAAC CCTTCGAGCA TTACACTTTT AGTTGGTATG AAATCTTGAT CCTGTTGGTC
GGTGTGTTAG CTGTGGCTGC CTTAGTGCGT TTTGGCTATT TATGGTTTTC CCAGCAATTG
GATGGCATTG AAGAATTAGC CTTACGCAGC CGATTGATTT TGCAAGGTAA GCACGAGCAA
GCGCTCGCGA CTCCCGGAAA TGGCAAGCCA AGGCTGATTA ACCGCGCTTT GACCAAGTTG
TTAGAAGAAT TACAAGACGC ACAAAAAGAG CGCGGTCGTT TTGACAAGTT CATTCGTTCT
AATACCTTTC TCGATGCGGA AACGCGCATT GGTAATCGAC TTTTCTTAAA TAACCGTCTC
GACGCCCTTA GTCATAATCA GGCTATGCTC GCCCATGGGG TGATTTATTT ATTAGAGATG
GATGATCTGG ATTTACTGCA GCAATCCCAA GGTGAAGCGG TAACCAAAGA GTTATTAAAC
TCGACTGTTA ACGCGATAAG CCAATTACTG CAAACCCAAG CCAACAGTAT TTTTGCCCGT
CGTTCCCACA ATCAATTTGC CATAGTTGTG CCGCAAATCT CGTTAATCGA AGCCGACCAA
TTCGCCAGTA AGTTACTTAA GATATGTTTG AGCCAGCCGT TACCCGAAGT CGAGAATAGC
GATAACTTTT TCCACCTCGG ATGCGCTTAT TTTACCGCAG GCGACAATGC GGCGCAGTTA
ATTGAAGAAG CCGATATGGC TTTGAGGGCG GCACAATTAC AGGGTAACAG TAATTGGTTT
ATGTACGACA AAGGCGCGAT TGATGAAGAG TTTGCTAAAG GCTCGGTGCG TTGGCGTAGC
TTTTTAGAAA ACGCGTTAGT GCAAAAGCGA TTCTTCCCCT TTAGCCAGCC GATAATTGAT
TCAGATGGTA ATGAGCACCA TAAAGAGATA TTTACTCGGG CGCGGGATAA TCAAGGAGCG
TTAATTCGTG CCACACTGTT TATTCCAATG GCGAATAAAT GTGGTTTAAT GCCGCAAGTC
GAACGGCAAA TTATTGAGCG GGTATTATTG TTACTGTCGA ACGAATTAGC GGACGGCGTG
TCGAATACTA AAAAAAATAA GAAATCAGCG CCACAGATAT ACAGTATAAA TCTGAGTTTG
GATTCGCTAA TGAGTCGAGC TTTTACCCAA TGGCTAAAAA CGACGCTGTT AGAATATCGT
CATTTGACCA CGCGACTGAT TTTCGAAGTG TCGGAAGATA TCGTGATTCA GCATCAAGAA
AAGTTGCAGC CTAAATTAGA TATGATCCGT AAAATGGGCG CGAGATTATG CGTCGATCAT
GTGGGCCAGC AGGTCGTTGG CACTTACTAT ATCCGTGAAT GTCATTTTGA TTTAATTAAG
CTACATAGAT CGATTGTGCG GCATATTCAT TTACGCCCAG AAAACCAATT ATTCATCCGT
AGCTTGATTG GCGGTTTGTA TCGAACGGAA GTGCAAGTTT GTGCCGAAGG GATTGAAGTC
TTCGAAGAAT GGCAGACACT GCAAATCCTT GGCGTTGGCG CAGCGCAGGG AATGTATTTC
AGTGAACCCA TTGAAGCTAA GTAA
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| Protein sequence | MKFTRMLTTK LTSFWLMSLA AIAFVFLLSA MMSFVQLTYK FQQQKVAELE TMLVDQYQHQ
PYWDLEAWLP PMLLAYNAVD FRLTLKDEVI FAYEGNLTTQ NAMVYDHVLD PKSGLRMQLT
LTQPFEHYTF SWYEILILLV GVLAVAALVR FGYLWFSQQL DGIEELALRS RLILQGKHEQ
ALATPGNGKP RLINRALTKL LEELQDAQKE RGRFDKFIRS NTFLDAETRI GNRLFLNNRL
DALSHNQAML AHGVIYLLEM DDLDLLQQSQ GEAVTKELLN STVNAISQLL QTQANSIFAR
RSHNQFAIVV PQISLIEADQ FASKLLKICL SQPLPEVENS DNFFHLGCAY FTAGDNAAQL
IEEADMALRA AQLQGNSNWF MYDKGAIDEE FAKGSVRWRS FLENALVQKR FFPFSQPIID
SDGNEHHKEI FTRARDNQGA LIRATLFIPM ANKCGLMPQV ERQIIERVLL LLSNELADGV
SNTKKNKKSA PQIYSINLSL DSLMSRAFTQ WLKTTLLEYR HLTTRLIFEV SEDIVIQHQE
KLQPKLDMIR KMGARLCVDH VGQQVVGTYY IRECHFDLIK LHRSIVRHIH LRPENQLFIR
SLIGGLYRTE VQVCAEGIEV FEEWQTLQIL GVGAAQGMYF SEPIEAK
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