| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0495 |
|---|
| Symbol | |
|---|
| ID | 7086971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 563823 |
|---|
| End bp | 564761 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643459422 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_002356452 |
|---|
| Protein GI | 217971701 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0687258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTC CATTAGATAC AGATTTGATT GTGATGGCAA TTTGGGGACT TATCTTTGCC
ATTTTCGTGA TTAAGCTTTT CCAATCGATT CGACTCGTTC CCACTAAGTC GGCTTATATT
GTGGAGCGTT TAGGTAAGTA CCACAGCACC TTAGATGCGG GTTTCCATAC CTTGATCCCC
TTCGTGGATA AAGTCGCTTT CATTCATGAT TTGAAAGAAG AGACCATCGA CGTACCGCCG
CAGGAATGTT TTTCGAGCGA CGAGGTTAAC GTTGAAGTGG ATGGGGTGAT TTATATCTCT
GTGACCGACC CAGTCAAAGC CAGTTACGGT ATTACCGATT ATCGCTACGC GGCTATCCAG
TTGGCGCAAA CCACCACACG CTCTGTCATT GGGACGCTGG ACCTTGACCG CACGTTCGAA
GAGCGTGATG TGATTTCTGC CAAGGTCGTG CAGGTATTAG ATCAAGCCGG TGCCCTGTGG
GGAATACGCG TGCATCGTTA TGAGATTAAA AATATCACCC CACCTGAAAC CGTTAAAAAT
GCCATGGAAA TGCAAGTGAA TGCTGAGCGT GAGCGCCGGG CATTATTGGC TAAGAGTGAA
GGCGACAAGC AGAGCAAGAT TAACCGTTCA GAAGGTGTTA AAGCCGAGAC GGTAAACCGC
TCTGAAGGTG AGATGCAGCG CCGTATTAAC GAAGCTGAAG GTAAGGCTGA AGAAATTTTA
ACTATTTCCC GTGCGACGGC GGAATCGATC GAACGTCTTG CCACAGTTAT TGCCGCGCCG
GGTGGCCACA ATGCCCTGCG GATGCAGCTT GGCGAGCAGT ACTTTAAACA GCTCGATGGC
TTAAGCCAGA AGAATAGCCG AGTGGTATTG CCGGGTAATA TGGTGGATTT CGATTACTGG
ATGAATAGCA TAGGCTTAAC GGAAGAAAAA CCGAGCTAA
|
|---|
| Protein sequence | MNLPLDTDLI VMAIWGLIFA IFVIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHTLIP
FVDKVAFIHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VTDPVKASYG ITDYRYAAIQ
LAQTTTRSVI GTLDLDRTFE ERDVISAKVV QVLDQAGALW GIRVHRYEIK NITPPETVKN
AMEMQVNAER ERRALLAKSE GDKQSKINRS EGVKAETVNR SEGEMQRRIN EAEGKAEEIL
TISRATAESI ERLATVIAAP GGHNALRMQL GEQYFKQLDG LSQKNSRVVL PGNMVDFDYW
MNSIGLTEEK PS
|
|---|
| |