Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0493 |
Symbol | |
ID | 7086969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 562405 |
End bp | 562875 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643459420 |
Product | protein of unknown function DUF107 |
Protein accession | YP_002356450 |
Protein GI | 217971699 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000358021 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTT CAAATCCGAT TTTAGTGTGG GCAGTGGTGG GGCTAGTATT TATGCTTGCC GAAATAGTGG TTCCCGGTGG CATCATAGTG TTGCTGGGCG CGGCTTGTTT AGTCGTGGCT GGCGCGTTAG GCATAGGACT AGTCGAAGGC GTAGTGCAGA GCATGACCCT GTGGTTTATC TCGGCCATTG TGTTGTTATT GACCTTCAGA CAAGTGACTC AAAGGCTCGT TGGTGGTGAT TCCCATGTGG ATAACACGGA TGAAGCAATC GATCTATACA ATCAAATTGT TCGCGTAAAG CAGACCATAG GTCCTGGGCA AGCACCCGGG CGGGTGGAAT TTCAGGGGAG TGAATGGCCA GCGCTGGGCG ATGGCACCAC TATCGCTGCG GGGACCGAAG TCAGAATTAT TTGTCGTGAA AATATCGCTC TAGTCGTTGA GCCTATTTCA ATAGAAGCTT CCAAAAACTA A
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Protein sequence | MEFSNPILVW AVVGLVFMLA EIVVPGGIIV LLGAACLVVA GALGIGLVEG VVQSMTLWFI SAIVLLLTFR QVTQRLVGGD SHVDNTDEAI DLYNQIVRVK QTIGPGQAPG RVEFQGSEWP ALGDGTTIAA GTEVRIICRE NIALVVEPIS IEASKN
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