Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0438 |
Symbol | |
ID | 7086914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 505760 |
End bp | 506563 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643459365 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_002356395 |
Protein GI | 217971644 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.081647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCAT ACATAGATAT CGCTGTCAAT TTACTTGGCA GCGCACTCGA GCCAGACACA GCATCGATAA TACAAGCGGC GGCGGACCAA GGGGTTTCGC CGTTAATTGT TATTGGCAGC GATTTAACTG AAAGTGCAGC TGCCATCGCG ATTTGCCAAC AATATCCCAA TCAACTTTAT TGCACTGCTG GCGTACATCC TCACCATGCC AGTGGCTGGC AAGCTGACTC AAGCAAGCGA CAAGCCGAAC TCTGCCAAGC ACCGCAAGTG GTTGCCGTTG GCGAATGTGG CTTAGACTAC AATCGTGATT TCTCTCCTCG CCCCATCCAG CGCCAAGCAT TTATTGCCCA ACTCGCCTTA GCCGTTGAAC TGCAAATGCC CGTACTGATG CACGAACGCG ATGCCCACGA AGACTTTATT GCTATCCTGC GGGAATATCG CCCACAGCTT AGTGGCGCGC TTTTACATTG TTTCACTGGC ACTCACGCCC AAATGGAAGC CTATATCGAC CTCGATTTGC ATTTAGGCAT TACAGGCTGG GTTTGCGATG AAAGACGCGG CCAAGAGTTA GCGCAACTCG TGCCATTTAT TCCGCAGAAC CGCATTTTAA TCGAAACCGA TAGCCCGTAC TTATTGCCTC GCAGCATGCG GCCTAAGCCT AAATCGAGTA AGAACAAGCC TGAATATCTC CCCTATATCG CGAGTTATAT TGCAAACTTA CGCGGTGAAA ATGCTGATGA GTTTGCAGCG CGTTGCTACC AGAATAGCGT AGCTTTTTTT AATTTGGACC GAGTCCATGC TTAA
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Protein sequence | MPSYIDIAVN LLGSALEPDT ASIIQAAADQ GVSPLIVIGS DLTESAAAIA ICQQYPNQLY CTAGVHPHHA SGWQADSSKR QAELCQAPQV VAVGECGLDY NRDFSPRPIQ RQAFIAQLAL AVELQMPVLM HERDAHEDFI AILREYRPQL SGALLHCFTG THAQMEAYID LDLHLGITGW VCDERRGQEL AQLVPFIPQN RILIETDSPY LLPRSMRPKP KSSKNKPEYL PYIASYIANL RGENADEFAA RCYQNSVAFF NLDRVHA
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