| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0362 |
|---|
| Symbol | rpoZ |
|---|
| ID | 7089500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 405140 |
|---|
| End bp | 405418 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459283 |
|---|
| Product | DNA-directed RNA polymerase subunit omega |
|---|
| Protein accession | YP_002356320 |
|---|
| Protein GI | 217971569 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
|---|
| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000000590702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA GAACAAATCG GCAACCGTTT TGATATGATC
TTGGTTGCGG CGCGTCGTGC TCGCCAAATC GCCGTGCAGG GTAAAGACCC TATGGTTGAA
GAGATGAACG ACAAACCAAC GGTTATCGCC CTGCGTGAAA TCGAACTAGG TTTAGTTAAC
GCTCACACCT TAGATGCCGA TGAGCGTCAA ACGGTACGTG AACGTGAAGC AGCTGAAATT
GCAGCAGTTT CAGCCATTGC TGAAGGCCGT TCATTATAA
|
|---|
| Protein sequence | MARVTVEDAV EQIGNRFDMI LVAARRARQI AVQGKDPMVE EMNDKPTVIA LREIELGLVN
AHTLDADERQ TVREREAAEI AAVSAIAEGR SL
|
|---|
| |