Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0359 |
Symbol | |
ID | 7089497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 400688 |
End bp | 402352 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643459280 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002356317 |
Protein GI | 217971566 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00409412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000100216 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATACAG CGATTAAGAC GCCAATTGAA ATGCTGGCGC ACTGGGCTAA GACTCAGGGG GATCAAGTCT ATTTACGCCA ACCTATCAAG GGTCAATTCC TTGATTTTAC TTGGGCCGAA GTTCAAGAAA AAGTTCAGCA ACTGGCCGGT GCCTTACAGC ATCTAGGCCT AGAGCGCGGT GATAAGATTG CCGTACTCTC TAAAAACTGC GCCGAATGGT TTATCACCGA CCTTGCGTTA ATGCACGGCG GCTATGTCAG CGTGCCGATT TACCCAACGG CCAACACAGA TACCATTCGC TATGTGCTGC AACACAGCGG TGCAAAAGCC ATTTTCCTCG GCAAGCTCGA CCATTGGGCC GACCAAGAAG CCGGTGTCGG CGGCGAGCTG CTACGTCTTG CTATGCCCTA CGATACAATG CCAGCCCAAT ATCAATGGGA ACAATTACTT AAACTAGGTT ATCCCCTAGT TGATGCCCCG CTACCGACGC CTGATCAAGT GATGACACTT ATCTATACCT CTGGCTCAAC GGGTCAACCT AAGGGCGCGA TTCAAACCTT CGCTAGCTAT GGCTGGACTT GCCAAGCGGT AGTGCGTGAT TTACGCACCG ACGGCAACGA CAGATTGTTA TCCTATTTGC CTTTAGCGCA CATCACAGAG CGCGTCGCGA TTGAAGGTTC ATCCTTCTAT TCCGGCAGCG TGGTCGCCTT CGTCGAGAGT CTCGACTCCT TCGTCGCCGA CGTGCAAAGG GCGAAACCGA CGGTATTTTT CTCAGTGCCG CGTTTGTGGA GCCTGTTCCA GAAAAACATC ATAGACAAAA TTGGTGTTAG TAAACTGAAT CTATTGCTGA AGATCCCGTT AATCAGCAGC TTAGTCAAAC ACAAAATCCA TAAAGGCTTA GGTTTGAACC ATTGTCGTTT GCTCGGCTCT GGCTCTGCGC CGATCCCGCC GTCGCTGATC CACTGGTATC ACAGCATTGG TCTGAATATC TGTGAAGCTT GGGGTATGAC AGAAAACTGC GCCTACTCGA TTATCAACTA CCCCTTCGAT GCCCGTAAAA TTGGCACAGT AGGTCGCCCG GTTGAGGATT GTCAGATCCG CCAAGGGGAA GATGGTGAGC TACTGCTTAA GAGTCCAGGG TTGATGACGG CTTATTATCT ACAGCCCGAA GCCACTGCGG CAGCATTCGA CGCCGATGGT TTCTTCCACA CTGGCGATTT ATGCTCTATT GATGCCGATG GTTGCGTGAC CATTACCGGC CGAGTGAAGG ACAACTTCAA AACCGCCAAG GGTAAATATG TCGCGCCCGT GCCTATCGAA CGTAAATTGG CGCAGGACCC GCATGTTGAA CTGATCTGCG TGATTGGCTC AGGCCTGCCG CATCCGGTCG CATTAGTGCA GTTATCCGAA GGCGCTAATC TGCAGGCCCG CGAAGAAGTC CGCACTTCAC TCAAGGCGAC ACTCGATAGC GTGAATCCGC ACTTAGAGTC ACACGAACAT GTGGATGCCA TTATCGTGGT TAGCGATCCT TGGACGATTG AGAACGATGT ACTGACACCG ACGCTTAAGA TCAAACGCCA TGTGCTTGAA AAAGCCTTTA GCGAAAGAGT TGATGGCATT CGTGGCGCCC AAGTTCGCTG GGAAGATGAG TTAACGCAAA AATAA
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Protein sequence | MDTAIKTPIE MLAHWAKTQG DQVYLRQPIK GQFLDFTWAE VQEKVQQLAG ALQHLGLERG DKIAVLSKNC AEWFITDLAL MHGGYVSVPI YPTANTDTIR YVLQHSGAKA IFLGKLDHWA DQEAGVGGEL LRLAMPYDTM PAQYQWEQLL KLGYPLVDAP LPTPDQVMTL IYTSGSTGQP KGAIQTFASY GWTCQAVVRD LRTDGNDRLL SYLPLAHITE RVAIEGSSFY SGSVVAFVES LDSFVADVQR AKPTVFFSVP RLWSLFQKNI IDKIGVSKLN LLLKIPLISS LVKHKIHKGL GLNHCRLLGS GSAPIPPSLI HWYHSIGLNI CEAWGMTENC AYSIINYPFD ARKIGTVGRP VEDCQIRQGE DGELLLKSPG LMTAYYLQPE ATAAAFDADG FFHTGDLCSI DADGCVTITG RVKDNFKTAK GKYVAPVPIE RKLAQDPHVE LICVIGSGLP HPVALVQLSE GANLQAREEV RTSLKATLDS VNPHLESHEH VDAIIVVSDP WTIENDVLTP TLKIKRHVLE KAFSERVDGI RGAQVRWEDE LTQK
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