| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0357 |
|---|
| Symbol | |
|---|
| ID | 7090052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 398645 |
|---|
| End bp | 399349 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643459278 |
|---|
| Product | TPR domain-containing protein |
|---|
| Protein accession | YP_002356315 |
|---|
| Protein GI | 217971564 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000167049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000000909482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT TATTAATCGT CTCAAGCTTA GCGCTTATCA GCAGCCACGC GTTTGCAGCG
TCGCCCTCTA ACGCCAATAT CACCAGCATA GATGCGGCCT CAAACTCGAT GAACCTAGCG
CAGCTGCAAC AACTCAGTGC CAGCACCCAA GATTACGACA AAGCCTATGC GAACTATCGC
TTAGCCATTA GCGCCAATGT CATGGGACAA AAAGTCCTCG CCAGCAGTGC ACTGACTAAT
GCGCAAACTG CATTAGAAGC CTTAGACACC AGCCAAGCTG ACGCGGAATC CCTCGCGCTG
TTATCGTCGG TTTATGGCAT GCAAATCGCT TTAGACAATA GCAAAGGCGC AGCTCTCGGG
ATGAAATCAG CCAAAGCCAT TGCCAACGCC GAGCAGTTAG AACCCCAAAA TCCACGGGTC
GCCTTGGTTA AAGCGATCGC CGCCTATAAC ACACCAGCTA TGTTTGGCGG CAGCATGCAA
AATGCTAAGA CGCTCGCCAC CACGGCCATA GAAAGATTCG CCCAACCTTG CGACGGCATT
TGTTGGGGTG AAGCCGAAGC TTACACGTGG CGCGGGCTCG CTAAACAGGA ATTAGGCGAT
AGCCAAGGCG CGAGTGAAGA TTGGCAACAG GCGATGAAAG TGCAAGCAGA TTACGGTTGG
GCAAAATTTT TGCTTCAACA AAATCAGCAA TTAAGTGCAA ACTAG
|
|---|
| Protein sequence | MKTLLIVSSL ALISSHAFAA SPSNANITSI DAASNSMNLA QLQQLSASTQ DYDKAYANYR
LAISANVMGQ KVLASSALTN AQTALEALDT SQADAESLAL LSSVYGMQIA LDNSKGAALG
MKSAKAIANA EQLEPQNPRV ALVKAIAAYN TPAMFGGSMQ NAKTLATTAI ERFAQPCDGI
CWGEAEAYTW RGLAKQELGD SQGASEDWQQ AMKVQADYGW AKFLLQQNQQ LSAN
|
|---|
| |