| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0324 |
|---|
| Symbol | |
|---|
| ID | 7086611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 367825 |
|---|
| End bp | 368277 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459246 |
|---|
| Product | thioesterase domain protein |
|---|
| Protein accession | YP_002356283 |
|---|
| Protein GI | 217971532 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0304239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAT TACTTACTCA ACTACTCATT CAATTACGCC AGACGTGGCA CAGTACTATT
CCTGTTAGTG AATTTATGCA GATTGCGCCA CTCGATTACA GCGAGGGTGA GTTTCGAGTC
ACAGCGCCGA TAGCGCCTAA TATTAATCTG CATCAGACCA TGTTTGCCGG CAGCATTTAT
ACCTTGATGA CCTTAACTGG CTGGGGCGCT GTGTGGCTGA ACCAGCAGTT AGCTGGCGTT
GCGGGTGACA TTGTGCTCGC CGATGCCCAT ATTCGTTATC TCGCCCCAGT GACTTGTGAT
CCTGTGGTAA CAGTGCAATG GCCAGATGTG GATCTCAGCC CGTTGCAAAG AGGTCGCAGA
GTGAAAGTGA AGTTAGCTGT GCAATTGTAT TGTGATGCTA AGCTTTGTGC GGTATTCGAA
GGCCTGTATG TCAGTGCGCC GAAAGCGAGT TAA
|
|---|
| Protein sequence | MDELLTQLLI QLRQTWHSTI PVSEFMQIAP LDYSEGEFRV TAPIAPNINL HQTMFAGSIY
TLMTLTGWGA VWLNQQLAGV AGDIVLADAH IRYLAPVTCD PVVTVQWPDV DLSPLQRGRR
VKVKLAVQLY CDAKLCAVFE GLYVSAPKAS
|
|---|
| |