Gene Sbal223_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0314 
Symbol 
ID7086601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp358441 
End bp359463 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID643459236 
Productdiguanylate cyclase 
Protein accessionYP_002356273 
Protein GI217971522 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCA ACCGACAGCA ACTGATCCGT TCGTTATTTG ACGAATATAT TGAGATGTAT 
TCCTCCCGTG ATGACAGGCT AACCCACCGC TTTAGTGAGA ACTTTAGCGG CTATGCTGGC
AGTAGTGACC AGCTTGTCAC CGACAGGGAA GAATGGGTGC GGATCACTCG GCAGGACTTT
GCACAAGTGC CTGAGCGGAT CCATATCGAA ATGTTAGATC TCTCCTTACA AGATCTTGCT
GATAACCTCG TGGTTGTGAC TGCCTTTTTC CATATCCACT TACCCATCCC TAATCCTATG
TTTTCCCGCG AAACGGCACG GCTAGTATTG ATATTTCGTT TAGAACACAA AGACTGGATG
ATTGCCCACA GTGGCATATC CATCCCCTAC GGCTTAGCCC ACAAAGGGGA GATTTACCCT
ATAGCCCGAT TAGAAGAGCG TAATGTCGAA CTTGAATCCA TGATCAAGGC ACGAACCTGT
GAGCTTGCAG AAGCTAATAG GCAACTCGAA ATACTCAGCA ATACCGATGG TTTAACCAAT
ATCGGCAACC GCCGCCTATT TGACATGATG TTACAAACGG AGTGGAGCCG AGGACAAAGG
AGCAACTCCT CACTGGCTCT CATCATGCTC GATATTGACC ACTTCAAACA ATTTAACGAT
CACTATGGCC ACCTCGCGGG AGATGATTGC CTTAAACAAC TGGCCAGTAC TTTATCCCAG
TCGGGCCGCA GGGCCGGCGA ACTCGTGGCT CGCTACGGTG GTGAGGAATT TGTCATTCTG
TTGCCCAATA TCGACAAACA AACGGTACTT GACACAGCGC AGCATATTCA TCAGTTAATC
CAAGCCATTG CCATTCCACA TGCGAATACC GACCTTGGTA TTGTGACCGT CAGCGCAGGA
GTCGCTTATC TGCAACCCTC AAACCAACAA AGCCCTTTAG AGTTAGTTCG CCAGGCCGAT
GCCGCGCTTT ACCGTGCAAA ATCAGCAGGC CGCAATTGCA TACGGGTGAT GAATGAGAAG
TAA
 
Protein sequence
MRPNRQQLIR SLFDEYIEMY SSRDDRLTHR FSENFSGYAG SSDQLVTDRE EWVRITRQDF 
AQVPERIHIE MLDLSLQDLA DNLVVVTAFF HIHLPIPNPM FSRETARLVL IFRLEHKDWM
IAHSGISIPY GLAHKGEIYP IARLEERNVE LESMIKARTC ELAEANRQLE ILSNTDGLTN
IGNRRLFDMM LQTEWSRGQR SNSSLALIML DIDHFKQFND HYGHLAGDDC LKQLASTLSQ
SGRRAGELVA RYGGEEFVIL LPNIDKQTVL DTAQHIHQLI QAIAIPHANT DLGIVTVSAG
VAYLQPSNQQ SPLELVRQAD AALYRAKSAG RNCIRVMNEK