Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0301 |
Symbol | |
ID | 7086588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 342168 |
End bp | 343337 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459223 |
Product | diguanylate cyclase |
Protein accession | YP_002356260 |
Protein GI | 217971509 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTTG ATCCCCAAGC CCTATTACTC ATCAAATTTA TTTGCCTACT GGCCAGCACT GCAGCCGTGG CATGGGGACT CATTGCTAAA CCCTTACAGA TTGCCACTCG GGCCAGTATG CGCTTTTCTC TGGCGAACTT GTTCGTCCTC CTTGGCATCA TACTCAACAG CCAACGCTCA GAAGCCTCCA GCTACCTTTT TTGGTTCTGC TCCGATATGG CGATTTTGTT TGGATTCATC CTATTACGCT GGGGTACTAA GGCACTTTTC AGGCTGAGTC CCAGCGTTAA ATCCGATCTT ATTCTCTTGG CAATCACGGC CAGTGTGATG CTCTCGGTTC CCCCCAACTT CAGCTCCGAA CGTACTTTAG CCGTTGTTTT CTCCGCCTGC GCCGCGCTGA TTTTTACCAT GCTAACGCGG GATAACTATC AGGCCATTAA ACGCGATACG GGGAATCGAG TCGCCATCGC TATGGTTATG CCTTTAGTCG CTATGGTGGG TATTTTTATC ATTCGCATCT TTATCGCCCT ACTTTCCCCA GAAGAAAGTC CGATGTTTAT CGCCATGCAC ACGCACGAAG CGATACCTGT GCTGTGGTTT TATGTATTTC TAACCCTATT GATCAATATC GTGATGATAG GTAATGCCAT GACGCGACTC GTCAGCAAAA TCCGTATGTT AGCGGAACGG GATCAACTCA CAGGCCTGTG GAATCGGCGG GCTATGCATA AGTTTCTCAA CAATATCCAT CAACGCTGGC TAAGGGATAA TGTGCCTTAC AGTATGATTT TATTGGATCT TGACCATTTT AAAGAGATTA ACGATCAATA CGGTCACGAT GCGGGTGATC TCGCCCTGCT GACGGCGGCG AGACTGTTCG GATCGGTATT GCGAGAAAAT GATGCCCTAT GTCGTCACGG TGGTGAGGAG TTTCTGGTGA TTTTGCCCGC GACCGATGCA CCCGCCGCCA GAGCCGTTGC CGAGAAATTA CATCAAGTAC TCAAGGACAA TTCATTTATC TGGCAAGGTG TTACGATAAA AATCCATGCT AGCTTAGGTT ACGCCACTAT CTATCAAGGA TGCCAGCCCG ACAAGCTACT CATTCAAGCG GACCAAGCCA TGTACCGCGC AAAATCTGAA GGCCGAGACC GTATTTGCCA GGCTTGCTAG
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Protein sequence | MIFDPQALLL IKFICLLAST AAVAWGLIAK PLQIATRASM RFSLANLFVL LGIILNSQRS EASSYLFWFC SDMAILFGFI LLRWGTKALF RLSPSVKSDL ILLAITASVM LSVPPNFSSE RTLAVVFSAC AALIFTMLTR DNYQAIKRDT GNRVAIAMVM PLVAMVGIFI IRIFIALLSP EESPMFIAMH THEAIPVLWF YVFLTLLINI VMIGNAMTRL VSKIRMLAER DQLTGLWNRR AMHKFLNNIH QRWLRDNVPY SMILLDLDHF KEINDQYGHD AGDLALLTAA RLFGSVLREN DALCRHGGEE FLVILPATDA PAARAVAEKL HQVLKDNSFI WQGVTIKIHA SLGYATIYQG CQPDKLLIQA DQAMYRAKSE GRDRICQAC
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