Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0300 |
Symbol | |
ID | 7086587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 341427 |
End bp | 342119 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459222 |
Product | pseudouridine synthase Rlu family protein, TIGR01621 |
Protein accession | YP_002356259 |
Protein GI | 217971508 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGAA TCATAGCCAA TGAGGCTGAT TTTATTGTTA TTTCCAAATC AGCCAAAGTG CATTTCCACA GTCAGGACGG AACAGCGGGC GTGGTGGCGC AGGCTGAGCA AGATCTGGGG ATTAAGCTTT TTGCCGTGCA TAGATTAGAC TCGCCCACGT CCGGTCTGTT GATTTTGGCC AAGAGCGCCG TCGCCGCTAA GCAATTTACT GAGCTATTTA CCGCCCATAA AGTGCAGAAG TATTATCTCG CCCTCGCTAA AGGCAAGCCG AAGAAGAAGC AAGGCTGGGT GATTGGTGAC ATGGCAAAGT CGCGGCGTAG CATGTTTAAA CTGCTGCGCA CTAAAGAGAA TCCAGCGATT ACGCAGTTTT TTTCATTGAG TGTCAGTGAG GGATTGCGTT TATATTTGCT TAAACCCCAT TCGGGTAAAA CCCATCAATT AAGAGTCGCC TTAGCAAGCT TAGGTGTGCC GATTTTAGGC GATGATTTAT ACGGCGGCAT GGCGGCGGAT CGTTGTTATC TGCACGCCTA CTGTCTGCAT TTTCGCTATG GCGATGAAGC GACTGGCTGG CGTGATTATG CGTATAGGGA TGTGCCGACT CAAGGTGAAC ATTTTGCCGC TGAAGGTGTG ATTGAGGCGC TGGTTGAATG GTTTGAACCC AATACTTTGG CTTGGCCGGC GAAAGGGGAT TAA
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Protein sequence | MYRIIANEAD FIVISKSAKV HFHSQDGTAG VVAQAEQDLG IKLFAVHRLD SPTSGLLILA KSAVAAKQFT ELFTAHKVQK YYLALAKGKP KKKQGWVIGD MAKSRRSMFK LLRTKENPAI TQFFSLSVSE GLRLYLLKPH SGKTHQLRVA LASLGVPILG DDLYGGMAAD RCYLHAYCLH FRYGDEATGW RDYAYRDVPT QGEHFAAEGV IEALVEWFEP NTLAWPAKGD
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