Gene Sbal223_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0215 
Symbol 
ID7085871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp242969 
End bp243826 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID643459135 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002356175 
Protein GI217971424 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000175088 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.378069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTG TAATCGCCTT ACTCGCCCCT GTATTTTGGG GGACGACCTA TGCGTTAGTG 
AGTCTCTACT TACATGATAT GTCGCCCTAT TGGGTGGCTG TGTGGCGCGC GCTGCCTGCG
GGGATACTGA TGTTGATGCT GCGTCCTCGC TTGCCAACGC TGGTGTGGTC AAAGCTCGGT
TTGCTGGCTT TTTGTAATAT CGGTGCCTTC TTCACCTTGT TATTTATCGG CGCGTATCGT
TTGCCGGGCG CAGTGGCGGG GACATTAGGG GCGACGCTGC CGTTAATTTT CTTAATCTTA
GCTTGGGTGA TTGATAAAAA ACGCCCTGAG ATTAAGTGGT TGCTATTAGG CTTGATGGGA
TTAGGAGGGG TGATTTTACT GCTTAACCCG TCGGCGGATC TCGATCCTAT CGGCGTGTTG
TGCATGTTGA GTGCCACGAC GTTAATTGCT TTCTCTTCTC GCTGGATGCA AAAGTGGGAT
GTGGGTGACT TTTTAGTGCT CACAGCATGG CAGCTGTTTT TGGGAGGCTT GATGTTAATC
CCGCTGGCGT GGTTTATGGC GGGCCCGCCG CAATTACCGA GCCTGACAGT GGTGCCATCG
TTAATATGGT TAGTGATTGC CAACACCGCC ATCGCTTATT GGGCTTGGTT GTGGTCGATG
CGAAATTTAG GGCCAGAAAT CATGGGCATG GTTGCTTTAG TCAATCCCGT GGTTGCCGTA
TCATTAGGGG TTATGATCGT GGGTGAGACA TTAGACATGC GTCAGTGGAC GGGGATAGGT
GTAATATTAC TGTCGCTGCT GTTGATGAAA TTGCCACAGA ATTTAAGGTT AAATCCATTT
AAAAAAGTGC AGCCCTAG
 
Protein sequence
MPFVIALLAP VFWGTTYALV SLYLHDMSPY WVAVWRALPA GILMLMLRPR LPTLVWSKLG 
LLAFCNIGAF FTLLFIGAYR LPGAVAGTLG ATLPLIFLIL AWVIDKKRPE IKWLLLGLMG
LGGVILLLNP SADLDPIGVL CMLSATTLIA FSSRWMQKWD VGDFLVLTAW QLFLGGLMLI
PLAWFMAGPP QLPSLTVVPS LIWLVIANTA IAYWAWLWSM RNLGPEIMGM VALVNPVVAV
SLGVMIVGET LDMRQWTGIG VILLSLLLMK LPQNLRLNPF KKVQP