Gene Sbal223_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0176 
Symbol 
ID7086778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp202240 
End bp203676 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content50% 
IMG OID643459096 
ProductO-succinylbenzoate-CoA ligase 
Protein accessionYP_002356136 
Protein GI217971385 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR01923] O-succinylbenzoate-CoA ligase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGACA CCCGCCTATC GCAGTCGCTA GCACTGTCCC CCGTGCACCA AGCCGCGCTG 
GCGTTTCCAC AGCAGACGGC CAGCAAGTTG GCGGGACAAG ACATTCGTTA CTCTGAGCTT
AGCCAGCGCG TTATCGCTCT GGGTCAGCAG CTAAGAGCAG CAGGCATTGC AGAGGGTGAG
CCACTAGCCT GTATTGCTGT GAATAACCTC GAGATGATTT GCCTCTATTG GGCCTGCATC
GATATCGGGG CGATCTTTTT CCCTATCTCA CCCCGTTTTC CTCTCGCGCA GATCCAAGGT
TTAATCGATG AACATCAGAT CCGCTATGTT TGGCGTGCTG AGATTTCTGA TCTGCAGAAT
TGCAGCCAAT TAGCCTTAGA TTTTAATGGC CTTAGCAACG AGTTAGCCCA GCCTATCGAT
GTTACCCGAC CCGCCAATGT GATTTTAACG TCGGGGTCTA GCGGTTTTCC AAAAGCGGCG
GTCCATTGCT TAGCCAACCA TATTGCTAAT GCCGAAGGCG CTCGCAGCTT AATCGCGCTC
GAACAAGGTG ATGCTTGGTT GCTCTCCTTG CCATTATTCC ACATTGGCGG TCTAGCGATA
TTAAACCGCT GTGCCTTAGT CGGTGCCACT GTTGTTATGC CAGATCACGC GCTGAGTCTT
AGTCAGCAAA TTGACCAAGA TAAGCTAACC CACCTCTCTT TGGTGCCAGC ACAACTGAGT
AAGTTATTAG CCGATACAAG TAGTAAACTT AAAAGTATCA AAGCCCTATT GCTGGGCGGC
GGCGCAGTCT CGATAGACTT ACTCGCGCAG CTTAAGCAAC GCAATATCGC CAGCTATACG
AGTTACGGCA TGACAGAAAT GGGCTCGCAG ATCACCACAG GTCCCGCATT AAGCGACGGC
AGCAGTGGCA AATTACTCCC CAAGCGTGAG CTTAAAACCG AAGACGATGT GATTTGGGTG
CGCGGCGAAT GCCTGTTTAT GGGCTACCTC ACCCCTGAGG GAATACAAGC TGGCGTTGAT
CAAGAAGGCT GGTTTTACAC TAAAGACAGG GGCGAATGGG ACGAAAATGG CAATCTACAC
ATCCTTGGCC GCGTCGATAA CATGTTCATC TGTGGCGGCG AAAACATCCA ACCAGAAGAA
ATCGAAGCCG CGCTTAAACA GCACCCGCAG ATAGATGATG CTATCGTTTT CGCCATCCCC
GATGCACAAT TTGGCAATCT CCCCGCCGCT ATCCTTCGCG GCAGTTTAAC TCATCACACA
GAATCGATTG CAAGTGAACT CGAATTGTTA CTCGCCGACA AAATCGCCCG TTTCAAACGC
CCAAGACAAT ATTATGTATG GCCAGAAAAT CATGAGCAGG CAGGGCTGAA AGTAAACAGA
AAAGCCTTGA TAACCGAGAC CGTAAATAGG TTCATTATCA CTAAAGTTCG AGGCTGA
 
Protein sequence
MSDTRLSQSL ALSPVHQAAL AFPQQTASKL AGQDIRYSEL SQRVIALGQQ LRAAGIAEGE 
PLACIAVNNL EMICLYWACI DIGAIFFPIS PRFPLAQIQG LIDEHQIRYV WRAEISDLQN
CSQLALDFNG LSNELAQPID VTRPANVILT SGSSGFPKAA VHCLANHIAN AEGARSLIAL
EQGDAWLLSL PLFHIGGLAI LNRCALVGAT VVMPDHALSL SQQIDQDKLT HLSLVPAQLS
KLLADTSSKL KSIKALLLGG GAVSIDLLAQ LKQRNIASYT SYGMTEMGSQ ITTGPALSDG
SSGKLLPKRE LKTEDDVIWV RGECLFMGYL TPEGIQAGVD QEGWFYTKDR GEWDENGNLH
ILGRVDNMFI CGGENIQPEE IEAALKQHPQ IDDAIVFAIP DAQFGNLPAA ILRGSLTHHT
ESIASELELL LADKIARFKR PRQYYVWPEN HEQAGLKVNR KALITETVNR FIITKVRG