Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0175 |
Symbol | |
ID | 7086777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 201018 |
End bp | 202256 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643459095 |
Product | response regulator receiver modulated diguanylate phosphodiesterase |
Protein accession | YP_002356135 |
Protein GI | 217971384 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGA TTAGAGTGAT GATCTTAGAA GATCACCCCT TCCAGCGGGC AGTGCTTGAG TATAATCTTG CGTCTCTTGC TGATGTTGAG GTGTTTGCTT TTGGAGCCGC TAAGGATGCG CTTGTTTGGC TTGATAAGCA TCATAGTGCT GACATTGTAA TATGCGATCT TATGATGGCA GATATTGATG GTCTATCTTT TCTACGTAAA GCGAAGGCCA GTTATGACAT TGCTTCAGTG GTTTTGTTTA GTTGTATTGA TCAGGAACTC AGACGTGCAG TATCACAGAT GATTAAAATG CTTAATTTTG AGTATCTTGG TGATCTGAGT AAGTCTCCTT CAGTAGATAA TTTACAGCGT ATGCTAGATA GATTCGCCTG CAGTCGAACC AAGAAAACTG AGGCCGCTTC TGATTTATGC ATGAGTAATA GTGTCGATAA ATTTGTAGTT GAAGACTTTG AACGCGCTAT ATCTGAAAGG CAATTTGTAG GCTTTTATCA ACCTAAGTTT GATGTTGCTG GTTTTAGTTT GAAAGGGGCT GAAATGCTTG CTCGCTGGCA TCACCCTGAT TTGGGATTGT TAAATCCAGG TAGCTTCATT GAACCGCTCA TTTCACACGG CTTACTTGAT GAGTTATTTT TACAACTTTT TGAGCAAGGT TGCAGCCTGC AGGAACGCCT GCAACAGCAA GGGTGTCAGA TTTCCTTGGC CTATAACCTC GACATATCTC AACTCAATTC GACTAAGTTA GTGTATCGAA TAGTTGATAT GGTTAGGGAA TTTAGCATTC TGCCGCAATT TATTACCCTT GAAATTACTG AGACAGGACT TCTCTCTGCA CCAGCCGTAA ATATGGAAAA TCTAATCCGC TTACGAATGC AAGGATTTGA ATTAGCAATT GATGATTTTG GCGCCGCATA TTCTTCATTG GCTCGTCTAT GTGAATTGCC TTTCTCGCAA ATTAAATTGG ATGGTTGTTT TGTGCATGCA CTTAGTGCTG AGCCTAGATG CCAAGCTGCA ATTTCCAGTG TCATTGCATT GTCTCACGCA CTTAATATGG AATTAGTGAT TGAAGGAATT GAAACAAATT CGCAATTGGT ATTACTGCAA CAGCTTGGGT GCACAACTGG TCAAGGGTAT TGTTTTTCAC GGCCAGTCGA TGAGGAGACA TTTATTCAGC GCTTTTTATC TGCAAGTTTA TATTCTGATT CTTCAAAAGA AATCAGCCTC GAACTTTAG
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Protein sequence | MSKIRVMILE DHPFQRAVLE YNLASLADVE VFAFGAAKDA LVWLDKHHSA DIVICDLMMA DIDGLSFLRK AKASYDIASV VLFSCIDQEL RRAVSQMIKM LNFEYLGDLS KSPSVDNLQR MLDRFACSRT KKTEAASDLC MSNSVDKFVV EDFERAISER QFVGFYQPKF DVAGFSLKGA EMLARWHHPD LGLLNPGSFI EPLISHGLLD ELFLQLFEQG CSLQERLQQQ GCQISLAYNL DISQLNSTKL VYRIVDMVRE FSILPQFITL EITETGLLSA PAVNMENLIR LRMQGFELAI DDFGAAYSSL ARLCELPFSQ IKLDGCFVHA LSAEPRCQAA ISSVIALSHA LNMELVIEGI ETNSQLVLLQ QLGCTTGQGY CFSRPVDEET FIQRFLSASL YSDSSKEISL EL
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