Gene Sbal223_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0175 
Symbol 
ID7086777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp201018 
End bp202256 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content41% 
IMG OID643459095 
Productresponse regulator receiver modulated diguanylate phosphodiesterase 
Protein accessionYP_002356135 
Protein GI217971384 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGA TTAGAGTGAT GATCTTAGAA GATCACCCCT TCCAGCGGGC AGTGCTTGAG 
TATAATCTTG CGTCTCTTGC TGATGTTGAG GTGTTTGCTT TTGGAGCCGC TAAGGATGCG
CTTGTTTGGC TTGATAAGCA TCATAGTGCT GACATTGTAA TATGCGATCT TATGATGGCA
GATATTGATG GTCTATCTTT TCTACGTAAA GCGAAGGCCA GTTATGACAT TGCTTCAGTG
GTTTTGTTTA GTTGTATTGA TCAGGAACTC AGACGTGCAG TATCACAGAT GATTAAAATG
CTTAATTTTG AGTATCTTGG TGATCTGAGT AAGTCTCCTT CAGTAGATAA TTTACAGCGT
ATGCTAGATA GATTCGCCTG CAGTCGAACC AAGAAAACTG AGGCCGCTTC TGATTTATGC
ATGAGTAATA GTGTCGATAA ATTTGTAGTT GAAGACTTTG AACGCGCTAT ATCTGAAAGG
CAATTTGTAG GCTTTTATCA ACCTAAGTTT GATGTTGCTG GTTTTAGTTT GAAAGGGGCT
GAAATGCTTG CTCGCTGGCA TCACCCTGAT TTGGGATTGT TAAATCCAGG TAGCTTCATT
GAACCGCTCA TTTCACACGG CTTACTTGAT GAGTTATTTT TACAACTTTT TGAGCAAGGT
TGCAGCCTGC AGGAACGCCT GCAACAGCAA GGGTGTCAGA TTTCCTTGGC CTATAACCTC
GACATATCTC AACTCAATTC GACTAAGTTA GTGTATCGAA TAGTTGATAT GGTTAGGGAA
TTTAGCATTC TGCCGCAATT TATTACCCTT GAAATTACTG AGACAGGACT TCTCTCTGCA
CCAGCCGTAA ATATGGAAAA TCTAATCCGC TTACGAATGC AAGGATTTGA ATTAGCAATT
GATGATTTTG GCGCCGCATA TTCTTCATTG GCTCGTCTAT GTGAATTGCC TTTCTCGCAA
ATTAAATTGG ATGGTTGTTT TGTGCATGCA CTTAGTGCTG AGCCTAGATG CCAAGCTGCA
ATTTCCAGTG TCATTGCATT GTCTCACGCA CTTAATATGG AATTAGTGAT TGAAGGAATT
GAAACAAATT CGCAATTGGT ATTACTGCAA CAGCTTGGGT GCACAACTGG TCAAGGGTAT
TGTTTTTCAC GGCCAGTCGA TGAGGAGACA TTTATTCAGC GCTTTTTATC TGCAAGTTTA
TATTCTGATT CTTCAAAAGA AATCAGCCTC GAACTTTAG
 
Protein sequence
MSKIRVMILE DHPFQRAVLE YNLASLADVE VFAFGAAKDA LVWLDKHHSA DIVICDLMMA 
DIDGLSFLRK AKASYDIASV VLFSCIDQEL RRAVSQMIKM LNFEYLGDLS KSPSVDNLQR
MLDRFACSRT KKTEAASDLC MSNSVDKFVV EDFERAISER QFVGFYQPKF DVAGFSLKGA
EMLARWHHPD LGLLNPGSFI EPLISHGLLD ELFLQLFEQG CSLQERLQQQ GCQISLAYNL
DISQLNSTKL VYRIVDMVRE FSILPQFITL EITETGLLSA PAVNMENLIR LRMQGFELAI
DDFGAAYSSL ARLCELPFSQ IKLDGCFVHA LSAEPRCQAA ISSVIALSHA LNMELVIEGI
ETNSQLVLLQ QLGCTTGQGY CFSRPVDEET FIQRFLSASL YSDSSKEISL EL