Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0159 |
Symbol | |
ID | 7086761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 183522 |
End bp | 184301 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643459083 |
Product | general secretion pathway protein J |
Protein accession | YP_002356123 |
Protein GI | 217971372 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4795] Type II secretory pathway, component PulJ |
TIGRFAM ID | [TIGR01711] general secretion pathway protein J [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTAA AACTGACTAG TGTGCAGCGG GGATTTACCC TGCTAGAAAT GCTGATCGCC ATCGCGATTT TCGCCATGAT AGGTTTGGCT TCTAATGCCG TGCTCAGCAC TGTGCTGACC AACGATGAAG TGACGCGCGC TTTCTCTACT CGGCTTAAGG CCCTGCAGCA AGGCTTTGGT GCGATTGAGC GTGATCTCGC CCAAATGGTG GCGCGCACAC CCAGATTACT CGAAGGGGGT CGAGGTTCGA CCGTCTTCCA AACGGGCAAT GATATCTTAG ACTCGGAATC AGAAGCCTTA GTGTTTTACC GTTTAGGTTG GTTAAATCCC GACGGTTTAT TACCGCGGGG CAGCTTACAG TCTGTGGCTT ATGTGGTGCA CGAAGGGCGA CTGGAGCGTT GGTATTTTCC TTATCCTGAG CCTGAATTTG GTGCCGAGCC GATTAAGACA GTGGTCATAG ATAAAGTATT GTCGGTGGAA TATTCCTTCT TTATGGATGA CAAATGGGAG CGCAAAGTCG AGGCGACTAA GTTGCCTAAA GCGATCGCCA TGGAAATTGA GATTGAAGGC TTAGGCAAGA TCCAACGTAA GTTCTTGCTG CCGCTAGGTG CTGCCGCACC TGACAAGTCC AAGGATGAAG ACAATAAAGA CGAAAATCCA GACGATGCCA ACAAAGATAA AAACGGCTCA GGTAACGGCA GTGGAACCGG CAATGGTTCC GGTGACCCAG ATTCTGGCGA TTCCGGAGAC GGTGATCCAA ACGCAGAGGG CCGCGAATGA
|
Protein sequence | MSLKLTSVQR GFTLLEMLIA IAIFAMIGLA SNAVLSTVLT NDEVTRAFST RLKALQQGFG AIERDLAQMV ARTPRLLEGG RGSTVFQTGN DILDSESEAL VFYRLGWLNP DGLLPRGSLQ SVAYVVHEGR LERWYFPYPE PEFGAEPIKT VVIDKVLSVE YSFFMDDKWE RKVEATKLPK AIAMEIEIEG LGKIQRKFLL PLGAAAPDKS KDEDNKDENP DDANKDKNGS GNGSGTGNGS GDPDSGDSGD GDPNAEGRE
|
| |