| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0154 |
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| Symbol | |
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| ID | 7086756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 179320 |
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| End bp | 180885 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643459078 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_002356118 |
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| Protein GI | 217971367 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA TACAATTATC CCAAGTCGAT GACCTCAGCC AAGTCTCCAA TGAGCTAGGT
CTGGAAGCTG AAGGTGATGA GGTGTTTCGT TCGAGCAGTA AAGAGCGTTT ACCCTTTGCC
TTCGCCCATC GCCACGATGT GGTGCTTGCG CCGGGTGAAA CGGGCGAGTT GAGCTTGTTT
TATACCAGCA AAACACCGTT AACGGCCATG CTCGAAGCAC GGCGTTATTC GGGTGTCGAT
TTGCCTTTGG TTAAGCTCGA AGTCACGAAG TTTGAGGCCA AACTTACTCA AGCGTATCAG
GCTAACTCGT CTGAAGCGCA GCAGTTGATG GAAGACATCG GCAACGAGAT GGATTTATTC
ACCCTTGCCG AAGAGCTGCC GCAGACTGAA GACTTGCTCG AAGGTGATGA TGACGCCCCA
ATCATCAAAC TGATTAATGC CTTGTTATCT GAAGCGATTA AAGAAGAAGC GTCGGATATC
CACATCGAAA CCTACGAGAA ACAGCTGGTG GTGCGTTTCC GCATCGATGG TGTGCTCAAG
GAAGTCCTCA AGCCAAACCG TAAGCTGTCG TCGCTGTTAG TGTCGCGGAT TAAGGTGATG
GCGCGCCTCG ATATCGCCGA AAAACGTGTG CCACAGGATG GCCGTATTTC GCTGCGTATT
GCTGGTCGTG CGGTGGATGT GCGGGTATCG ACCATGCCAT CGAGCCACGG CGAACGCGTC
GTGCTGCGTC TGCTGGATAA AAATACCGGT AACCTCGATT TAGAACAACT GGGGATGACC
GACGGTATTC GGGTTAAGTT TGAAGATCTT ATTCGTCGCC CCCACGGCAT CATTCTGGTC
ACTGGCCCAA CGGGTTCGGG TAAAAGTACC ACCTTGTATG CGGGTCTGAC TGAAATCAAC
TCAAAAGACA CCAACATTCT TACCGTGGAA GACCCTATCG AATACGAGCT AGACGGTATC
GGTCAAACCC AAGTTAACAC TAAGGCTGAT ATGACCTTCG CCCGAGGTCT GCGCGCGATT
TTGCGTCAAG ATCCCGATGT GGTGATGATC GGTGAAATCC GTGACTTGGA AACCGCGCAA
ATTGCGGTGC AAGCATCGCT CACTGGTCAC ATGGTAATTT CAACCCTGCA TACCAACACA
GCGTCTGGCG CGATAACGCG TTTGCAAGAC ATGGGCGTTG AGCCATTCCT CGTATCATCG
AGTTTGCTCG GTGTGTTGGC GCAACGTTTG ATCCGTACCC TTTGTCCAAA ATGTAAAATC
GAGCACGTGC CCGATGCGCG TGAGCGTGAG TTACTGGGCA TAGCGGCCGA TGACGACAGG
CGTATTTTCC GTGCCAATGG CTGTAAATCC TGTGGTAACA ATGGCTACCG TGGTCGAACG
GGTATTCATG AGTTATTGCT GGTTGACGAC AATGTCCGCG AATTGATCCA TGGCGGCCGC
GGTGAGTTAG CTATCGAAAA GTATATCCGT CAGTTTGTGC CGAGCATTCG TCACGATGGC
ATGAGCAAAG TGCTCGCGGG CATCACCACT CTCGAAGAAG TGCTACGTGT GACTCGCGAG
GAGTAA
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| Protein sequence | MSEIQLSQVD DLSQVSNELG LEAEGDEVFR SSSKERLPFA FAHRHDVVLA PGETGELSLF
YTSKTPLTAM LEARRYSGVD LPLVKLEVTK FEAKLTQAYQ ANSSEAQQLM EDIGNEMDLF
TLAEELPQTE DLLEGDDDAP IIKLINALLS EAIKEEASDI HIETYEKQLV VRFRIDGVLK
EVLKPNRKLS SLLVSRIKVM ARLDIAEKRV PQDGRISLRI AGRAVDVRVS TMPSSHGERV
VLRLLDKNTG NLDLEQLGMT DGIRVKFEDL IRRPHGIILV TGPTGSGKST TLYAGLTEIN
SKDTNILTVE DPIEYELDGI GQTQVNTKAD MTFARGLRAI LRQDPDVVMI GEIRDLETAQ
IAVQASLTGH MVISTLHTNT ASGAITRLQD MGVEPFLVSS SLLGVLAQRL IRTLCPKCKI
EHVPDARERE LLGIAADDDR RIFRANGCKS CGNNGYRGRT GIHELLLVDD NVRELIHGGR
GELAIEKYIR QFVPSIRHDG MSKVLAGITT LEEVLRVTRE E
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