| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0152 |
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| Symbol | |
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| ID | 7086754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 176253 |
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| End bp | 177182 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643459076 |
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| Product | general secretion pathway protein C |
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| Protein accession | YP_002356116 |
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| Protein GI | 217971365 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.641233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAT TAGATAAAGT TATCGCAAAA GCCATTGGCA TGCCCCATAA ACCCCTAAGC
CGGATCGTCT TCTGGTTGGG CTTTATTGTG ATCATGTTGT TAGCTGCGCA AATTACATGG
AAATTAGTGC CTACTAGCTC ATCAGCCAGT GCTTGGTCCC CAACGCCCGT AAGCGTGAAT
GGCAAAGGTG CTGGTCAGGT TGATCTCGCA GGTCTGCAGC AGCTTGGACT CTTTGGTAAG
GCGGATGCGA CATCTGATAA ACCTAAAGTC GAAGCGGTCG AGACTGTGAC CGACGCACCT
AAGACTACAC TCTCTATTCA GCTGACTGGG GTTGTCGCAT CGACAGCGGA CCAGAAAGGC
CTCGCAATTA TTGAGTCAAA CGGCAGCCAA GATACTTATA GCCTCGGCGA TAAGATCAAG
GGCACATCTG CATCACTCAA AGAAGTCTAT GCCGACCGTA TCATTATCAC TAACGCTGGC
CGTTACGAGA CCTTAATGCT TGATGGCTTA GTGTACACCA GCCAAAGCCC AGCCAATCAG
CAGTTACAAC AAGCTAAGAG CAACAAGGCC GGCTCGGCAG TGAGCCGTGT TGATCAACGT
AACAATGCCG ATATTTCCCA AGAGCTCGCC GAATCCCGCA CCGAATTGTT AGCCGACCCC
AGTAAGATCA CCGATTACAT TGCCATTTCA CCCGTGAGAC AGGGTGATTC TGTGGCGGGT
TATCGTCTGA ATCCGGGTAA AGACGCCAAT TTGTTCAAGC AGGCGGGTTT TAAAGCCAAT
GATTTAGCTA AATCGATTAA TGGATACGAC TTGACCGTAA TGAGTCAGGC GTTAGAAATG
ATGAGCCAAT TATCCGAGTT AACCGAAGTA TCAATTATGG TTGAACGGGA AGGACAATTG
GTTGAAATCA TGTTTAGTTT GCCGCAATAA
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| Protein sequence | MDLLDKVIAK AIGMPHKPLS RIVFWLGFIV IMLLAAQITW KLVPTSSSAS AWSPTPVSVN
GKGAGQVDLA GLQQLGLFGK ADATSDKPKV EAVETVTDAP KTTLSIQLTG VVASTADQKG
LAIIESNGSQ DTYSLGDKIK GTSASLKEVY ADRIIITNAG RYETLMLDGL VYTSQSPANQ
QLQQAKSNKA GSAVSRVDQR NNADISQELA ESRTELLADP SKITDYIAIS PVRQGDSVAG
YRLNPGKDAN LFKQAGFKAN DLAKSINGYD LTVMSQALEM MSQLSELTEV SIMVEREGQL
VEIMFSLPQ
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