| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0148 |
|---|
| Symbol | |
|---|
| ID | 7086750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 172974 |
|---|
| End bp | 174515 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643459072 |
|---|
| Product | phosphoenolpyruvate carboxykinase |
|---|
| Protein accession | YP_002356112 |
|---|
| Protein GI | 217971361 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
|---|
| TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATG GATTAAACCG CGTTCACTTT AACCCCTCAA CAGCACAACT TGTCGAATTT
GCCCTGCTAC GCGGCGAAGG TGAATTGACA GCCAATGGCG CATTAGTCGC TAAAACAGGC
GCTCGCAGTG GTCGCTCACC CGGCGATCGT TTTATCGTAA GAGAACCCAG TTCAGAAGCA
GAGATTGAAT GGGGCCCTGT CAATCAAGCT TTCGACCCAG GTGCTTTTGA AGGTTTATGG
GCACGGGTTG AAGCTTACCT AGCCGATAAA GAACTGTTTG TCTCTGATCT CGAAGTCGGT
GCCGATACAG AGCATTACCA GCCAGTACGT GTGACCACGC AATACGCTTG GCACCAACTG
TTCGCCCGCA ATCTATTTAT CATTCCTGAA GAATTTAATC GTAAAGACAA ACCTGTGTGG
CAGATCATCA ATGCCCCTGA CTTTGTTTGC GATCCAGCGC GTGATGGCAC TAACTCAGAT
GCGACCGTGA TTTTAAACTT CGCCGAACGT AAAGTGCTGC TCGCGGGCCT GAAATACGCC
GGCGAAATGA AAAAGTCTAT GTTCTCAGTG CAGAACTTCC TACTGCCAGC CCAAGGCGTG
CTACCTATGC ACTGCTCGGC CAACGTAGGT AAAGATGGCG ACACTACGCT ATTTTTCGGT
TTATCTGGCA CAGGTAAAAC CACACTCTCT GCCGATCCAA AACGCTTCCT GATCGGTGAC
GATGAACACG GCTGGGCACC TGGCGGCGTA TTCAATATTG AAGGCGGTTG CTACGCCAAA
TGTATCGATT TAAGCCAGAA GAATGAACCT GTTATTTGGG ATGCGATTCG TTTTGGCACT
GTGCTTGAAA ACGTCGTAAT GGACAAACAC CGCGTACCCA ACTACAAAGA CAGCAGCCTG
ACGGAAAACA CCCGCGCAGC GTATCCGCTG GAGCACATCG CCCAACGTAA AGAAGACAAC
TGCGGCGCCG AGCCACATGC CGTTGTGTTC TTAACCTGCG ACGTATCTGG CGTATTACCA
CCTGTGTCTA TCCTGACCAA AGAACAAGCG GCATACCACT TCTTGTCTGG CTACACAGCT
AAAGTGGGTT CGACTGAAAT CGGCTCAACC TCAGCGATCC AATCGACCTT CTCAACCTGC
TTCGGTGCAC CTTTCTTCCC ACGCCCTGCT GGCGTGTACG CTGAACTGTT AATGAAGCGC
ATTGAGTCCT TCGGTAGCCA AGTGTACTTA GTCAACACCG GTTGGACTGG CGGTCCACAC
GGTGTGGGTA AACGTTTTGA CATCCCCACC ACTCGCGCCA TCGTCGATGC GATTGTAAGC
GGTGAATTGA AAGATGTTGA AACCGTCCAC TTAGACACAT TGAACCTCGC TGTTCCTGTG
GCAGTAAGTG GTGTAGACAG CAATTTACTC AACCCAATCA ACACTTGGGG CGATAAAGCG
CTATACGCCG AATACGCCCA GAAGCTGGCC GAAGCTTTCA CTAAAAACTT CGCTAAGTAT
CAAGTGTCTG ACGCTATCCG CAACGCTGGT CCAAAGGCAT AA
|
|---|
| Protein sequence | MADGLNRVHF NPSTAQLVEF ALLRGEGELT ANGALVAKTG ARSGRSPGDR FIVREPSSEA
EIEWGPVNQA FDPGAFEGLW ARVEAYLADK ELFVSDLEVG ADTEHYQPVR VTTQYAWHQL
FARNLFIIPE EFNRKDKPVW QIINAPDFVC DPARDGTNSD ATVILNFAER KVLLAGLKYA
GEMKKSMFSV QNFLLPAQGV LPMHCSANVG KDGDTTLFFG LSGTGKTTLS ADPKRFLIGD
DEHGWAPGGV FNIEGGCYAK CIDLSQKNEP VIWDAIRFGT VLENVVMDKH RVPNYKDSSL
TENTRAAYPL EHIAQRKEDN CGAEPHAVVF LTCDVSGVLP PVSILTKEQA AYHFLSGYTA
KVGSTEIGST SAIQSTFSTC FGAPFFPRPA GVYAELLMKR IESFGSQVYL VNTGWTGGPH
GVGKRFDIPT TRAIVDAIVS GELKDVETVH LDTLNLAVPV AVSGVDSNLL NPINTWGDKA
LYAEYAQKLA EAFTKNFAKY QVSDAIRNAG PKA
|
|---|
| |