| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0137 |
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| Symbol | |
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| ID | 7086739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 156191 |
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| End bp | 159415 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643459061 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002356101 |
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| Protein GI | 217971350 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCAG CGCTACACCA CCTCAGTTTG AAGCAAAAGC TCATTCTGTT TTCGCTTGTC
CCCTTGTTGA TGATGAGTTT TTTTATTCTG ACTCGCATGC ATGGCTTAAT AAATGAATCA
CACTCGGCCA AGCACAACCA TCTTGCGGTG CAGACGACGG TACAAATCAC TGAATTACTG
TATCAGTTGC AAAACGAATA TGGCCTGAGC ACCAATCAAC TGCCCGCCGA TAACGCGCTA
GTCGCGCAAC AACAGGCGAC CTCCAACGCA TTCAATACGT TACTTAACAG CGAACCTTTA
GCCCACCTCT GTGAGGCGCT CGATCCTAAG AGTATTGAAG CCAGTCAGAT GAACGCATTA
TTAGATGCCA TCACACTCAC GGGCCACAGA CTCGCCAACG CACGCCAAAC CCTTGCGAGC
GAAACACAAA GCCCGTTTAC TGACCGCTAT AGTCAACTGC ACACTCAGCT GTTGCAGCTC
ATTCAACTAT TGCAGTTACA GACCAACGAA ATCAGCCAAT CCCGCGCCTA TACCGATTTA
TTGAACCTGC TAATGGTGCA GGAACTCGCC GTAAAAGAAC GTAGCGCAAT CAATCATTTG
TTACTCAGCG ACTCACTCAA TCTGAATGAT TACCGCACCA TAGGATCCTT CATGTATGAA
TATGGCCGAG CCGTGATGCA CGCGAGCAAT GCAGCGATTT CCGATAGAAA ATCGTTACTG
CAAAACCTGC AAGATTCGCC AGAGAATCAA CGTATTCTGC AGATAAGCCA ACAAATTGAG
CAGCAAACCC GCATTAGCGC ACTGGCACAG AATATTAATG CCAACTTAGG TTACGGTGGC
TTAATGGGGA GTTTTCAGGA CTATCTGCTG AAGGGCGATG ACGTTTCACT GCAAAAATTT
AATAGCGCGC TGGCGACGAT TCACCTCAAC TTAGATGAAC TCAATCACGA GACCCGCTTT
CTTCCCAAAT TTAAGCCAGC GCTGAAAACC ATTGAGAACA GCATAGATCA ATACCAATTC
AGCATGGCCA AGCTGCAGCA ACTGAAGCAG CAAGGCTTGC CGATGGCGGA GATCAACGCC
ATCGCGCAAG TCCCAGCCAG TGAGGACAAG TTAAGCCAAG CGATGACACA GCTGTTAATG
CCGCCACATC CGATTGACAG CCAAAAATGG TGGGCACTCA CCACCCAGCG TATTGAACAA
CTGCATCAAC TCGCCAAAGA CATCACCCAA ACCATGGCGC AGCAGAGCGA GTTTCAACAA
AACCAAGCCC TGACCTTCCT CGGCCTGTAC TTGTTATCAG CCCTGTTCAC CGCAACCGTT
ACACTCTGGC TCGGACAGAA GATCATTCGT AACTTTATGG ATAAAATCAC TAAGATTGCT
AATGACATGC AACAAATGGC GGAAGATCCC AAGCTCAATA TCAATATCCG CGTCTCAGGT
ACTGATGAAC TCGCTCGCAT GGCCCGCGCC ATGAACCGGA TGATCAGCGA ACGGCAGAAG
GCGAACCATG CACTCACCCG CGCCGCTGCG GTATTTGACT ATTCTGCCGA GGGCATAATG
GTGACTGATG CCGACAACCA TATCGAACTG GTCAATCCGG CTTTCTGCAA TATTACTGGC
TATACATTGG AAGAAGTGAA AGGCCGCAGT CCATCCATCC TCAGTTCTAG CCGTCATTCG
CAGCACTTTT ACACCACCAT GTGGGAGTCG CTGCAAACGG AAGGAAAATG GGAGGGCGAG
GTTTGGAATA AGCGTAAAAA TGGCCAAGTG TATCCCGAGT ATCTAGCCAT TACTGTGGTG
CGAAATGAGC AAGGACAAAT AATCCAACAC ATTGGTTTAT TTATGGATAT CAGTAAACGT
AAACAATATG AGCAAGATCT TTGGTATCAA GCCAACTTCG ATGCGTTAAC GGGACTGCCT
AATCGTAAGT TGTTTAATGA ACGCCTGCAG CACGAAATCC ATGTGGCGCA GCATGATTCA
CGCAAACTGG CGATTCTGCT GATTGACTTA GACCAATTCA AATACATCAA CGATGTGCAA
GGCCATGCCA CGGGCGACCT ATTGCTTAAA GATGTGGCCA AACGCTTAGA AGGCATTGCG
GGTAAAACCG ACTTTATCGC CCGCATTGGT GGCGATGAGT TTGTACTTAT TTTGCCGCGA
CTGACAAACG AACTCGCCAT CGAACACATG GCAACGCGTA TTATCGAAAC CTTAGGCATG
CCGTTTGACT TAAATGACCG CGAGATCCAG ATTTCAGCCA GCTTTGGTAT CGGCGTCTAT
CCCGAAGATG GCCTCGATGT CAGCTCACTC ACCCGCAATA CCGAAACCGC CATGTATCAA
GCTAAAGATG CGGGACGGAA CAATTTCAAA TACTTTACTG CGGGCATGAA TGAAGCCATG
TTCGCTCGGA TGGAGTTAGA GCAACGCCTG CGCCGCGCCG TGGCACAAAA TGAATTTGCC
CTGCATTATC AACCCATAGT GGATATGCAA ACTGGAGTCG TCTGCAGCGT CGAAGCCCTT
ATCCGCTGGC AAGACCCTGA CTTTGGCCTG ATCCCACCGG ATCAATTTAT CCCGCTGGCC
GAAGAAACCG GACTGATAGA ACCTATGGGC GAATGGGTGC TCAACCAAGC CATGCATGAT
TTGAGACAGT GGCAGAAAAG TGGCTTAAAA ATCAATGTTG CGATTAATGT TTCCGGTCGT
CAATGTATCA ACACCCGCGG CATGGGATTC GACCAAGTGC TGCAGGAATG CTTTAACCGC
CACCATGTGA ACCCGCGCAA TGTGCATATT GAGATCACAG AAAGCATGCT GATGGGCGAT
GCCAGCCACT GCTTGAGCAC GCTCGAATCT ATTCGCCATT TAGGCTCGCA AATCTATATC
GATGACTTTG GCACAGGTTA TTCTTCCCTG AGTTATTTGA AAAAATTCCC TATTTCAGTG
ATTAAAATCG ATCGTAGCTT TGTGGAAAAT GCCCTCGAAA GTAACGCTAA TGCTAACTTA
GTCAAAGCTA TCGTCATGAT GGGGCAAAGT CTCGAAATGG AGTTAGTGGC CGAAGGCATA
GAAACCGAGG CCCAGTGGCA CTTTCTGCGT GATTTAGGTT GCCACTTCGC CCAAGGATAT
TTGATCTCTA AACCACTGCC CTTCGACGAG ATCACCCCCT TGCTGCACAT CAAGCACACA
GCACTGCTCA ACCACGATTA CCAAGATAGA TGCGTGAATA TCTAA
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| Protein sequence | MPSALHHLSL KQKLILFSLV PLLMMSFFIL TRMHGLINES HSAKHNHLAV QTTVQITELL
YQLQNEYGLS TNQLPADNAL VAQQQATSNA FNTLLNSEPL AHLCEALDPK SIEASQMNAL
LDAITLTGHR LANARQTLAS ETQSPFTDRY SQLHTQLLQL IQLLQLQTNE ISQSRAYTDL
LNLLMVQELA VKERSAINHL LLSDSLNLND YRTIGSFMYE YGRAVMHASN AAISDRKSLL
QNLQDSPENQ RILQISQQIE QQTRISALAQ NINANLGYGG LMGSFQDYLL KGDDVSLQKF
NSALATIHLN LDELNHETRF LPKFKPALKT IENSIDQYQF SMAKLQQLKQ QGLPMAEINA
IAQVPASEDK LSQAMTQLLM PPHPIDSQKW WALTTQRIEQ LHQLAKDITQ TMAQQSEFQQ
NQALTFLGLY LLSALFTATV TLWLGQKIIR NFMDKITKIA NDMQQMAEDP KLNINIRVSG
TDELARMARA MNRMISERQK ANHALTRAAA VFDYSAEGIM VTDADNHIEL VNPAFCNITG
YTLEEVKGRS PSILSSSRHS QHFYTTMWES LQTEGKWEGE VWNKRKNGQV YPEYLAITVV
RNEQGQIIQH IGLFMDISKR KQYEQDLWYQ ANFDALTGLP NRKLFNERLQ HEIHVAQHDS
RKLAILLIDL DQFKYINDVQ GHATGDLLLK DVAKRLEGIA GKTDFIARIG GDEFVLILPR
LTNELAIEHM ATRIIETLGM PFDLNDREIQ ISASFGIGVY PEDGLDVSSL TRNTETAMYQ
AKDAGRNNFK YFTAGMNEAM FARMELEQRL RRAVAQNEFA LHYQPIVDMQ TGVVCSVEAL
IRWQDPDFGL IPPDQFIPLA EETGLIEPMG EWVLNQAMHD LRQWQKSGLK INVAINVSGR
QCINTRGMGF DQVLQECFNR HHVNPRNVHI EITESMLMGD ASHCLSTLES IRHLGSQIYI
DDFGTGYSSL SYLKKFPISV IKIDRSFVEN ALESNANANL VKAIVMMGQS LEMELVAEGI
ETEAQWHFLR DLGCHFAQGY LISKPLPFDE ITPLLHIKHT ALLNHDYQDR CVNI
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