| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0108 |
|---|
| Symbol | |
|---|
| ID | 7087373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 127137 |
|---|
| End bp | 128567 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643459032 |
|---|
| Product | selenocysteine synthase |
|---|
| Protein accession | YP_002356072 |
|---|
| Protein GI | 217971321 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA TGATGACCCA AGCACCCGAA ACGCCACAAG CCTTGTACCG CGCTTTGCCC
TCAATGGACA GCTTACTGGC GGAGCCTAGC TTTGTTGTAT TGCAGCAGTC TTACGGCAAA
GTGGCAGTAA AGGCGGCGCT GGATAGCCAG TTAAAGGCGG CGCGTAGCTT AATCGGCAGT
GAGCGCCGGT TGCCGACATG GTGTGGCGAG CTTGCGCAAT TGCACGGATG TTTGGTTGAT
CAACTGTCTA AAGATTACAG CCACAGCTTA ATACCTGTGT GGAATCTTAC TGGCACCATA
CTGCATACCA ACCTCGGCCG AGCGCAGCAG TCAGAAGCGG CGATTCGAGC CGTGACTTCT
GTTATGCGCT ACCCCACACC GCTGGAGTTT GAGCTTGCGG CAGGTGAACG TGGTCACAGG
GATAATGCGA TCAGTGCTTT AATCCAGCGC TTAACGGGTG CCGAGGCTTG TTGTGTCGTG
AATAACAATG CTGCTGCTGT GTTGTTGATG CTGTCAGCTG TGGCTGCGGG GAAAGAAGTC
ATAGTCTCCC GTGGTGAGTT GGTGGAAATT GGCGGCGCGT TTCGCATCCC TGACATTATG
CGCCAAGCAG GCTGCACCTT AGTTGAGGTC GGCAGTACCA ATCGGACACA TTTTAAGGAT
TATGAGCAGG CGATTACTGA AAATACCGCT GCAATAATGA AGGTCCACAC CAGTAATTAT
CATATCAGTG GCTTCACTGC CGCAGTGGAG GAGGCAAGAC TGGGTCAGCT ATGTTGTGAG
CATGGCATAT CACTCATTTC GGATCTTGGT AGTGGTTCAC TGACGGACCT GCGCCGCTTT
GGGCTAAAAC AAGAACCTAC GCCTCAAGCC ATGCTGGCCG ATGGTGTCGA TTTAGTGAGT
TTTTCCGGCG ACAAACTATT GGGTGGCCCT CAGTCTGGTT TGATCGTTGG TAAACAGTCG
CTGATTAAGC AGTTACAGAG TCATCCACTA AAGCGCGCCC TACGTTGCGA TAAGCTGATT
TTGGCGGCGT TAGAGGCAAC ATTGATCCAC TATCTTAACC CTGAAACCTT AGACTCTGAG
CTGCCCATTA TGGCGAAATT TGCCCGTAGC CAAGAGACGT TATGGCAGAT TGGTCGTCGC
TTACAGCATG CTTTGGCAGC GCACTTTGAA CCTTGTTATC GCATTGAATT AGTTGAGTGC
CAAACACAGG TCGGCAGTGG CTCGCAGCCC GACACTTTTT TACCCTCAGT GGCGCTGTGT
TTTACCGCAC TCGATGGCGG TAGTTTAAGT TTGTTAGAAC AAAAATTTAA GCAGGCGGCA
CGGCCTATCA TAGGTCGCAT GAGTAACGAT CAACTCAGAT TAGATTTACG CGGTCTTGAT
AGTGAAGCCG AGCTACTCGC CGAGCTGAGC ACCTTAGGTA TGCAGTTGTG A
|
|---|
| Protein sequence | MTQMMTQAPE TPQALYRALP SMDSLLAEPS FVVLQQSYGK VAVKAALDSQ LKAARSLIGS
ERRLPTWCGE LAQLHGCLVD QLSKDYSHSL IPVWNLTGTI LHTNLGRAQQ SEAAIRAVTS
VMRYPTPLEF ELAAGERGHR DNAISALIQR LTGAEACCVV NNNAAAVLLM LSAVAAGKEV
IVSRGELVEI GGAFRIPDIM RQAGCTLVEV GSTNRTHFKD YEQAITENTA AIMKVHTSNY
HISGFTAAVE EARLGQLCCE HGISLISDLG SGSLTDLRRF GLKQEPTPQA MLADGVDLVS
FSGDKLLGGP QSGLIVGKQS LIKQLQSHPL KRALRCDKLI LAALEATLIH YLNPETLDSE
LPIMAKFARS QETLWQIGRR LQHALAAHFE PCYRIELVEC QTQVGSGSQP DTFLPSVALC
FTALDGGSLS LLEQKFKQAA RPIIGRMSND QLRLDLRGLD SEAELLAELS TLGMQL
|
|---|
| |