Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0103 |
Symbol | |
ID | 7087368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 119354 |
End bp | 120895 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643459027 |
Product | histidine ammonia-lyase |
Protein accession | YP_002356067 |
Protein GI | 217971316 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTG TGAATCACTT AGTGTTAACG CCGGGTAGCT TGAGCCTAGC GCAATTACGC GAAATCAGCC GCCATAAGCT GACACTCGAA CTCGCGCCAG AGGCCATTAC CGACATCAAC ACCAGCGCGC AAATCGTGCA AAAAGTGTTA GATGAAGGCC GCACCGTTTA CGGCATCAAC ACGGGTTTTG GCTTGTTGGC CAATACCAAG ATAGCGCCCG AAGATCTGCA ATTGCTGCAA CGCTCAATCG TGTTGTCGCA CGCCGCAGGT ACGGGCCAAT ACATGCAAGA CGCCACAGTA CGTTTGATGA TGGTGTTAAA AATCAATTCA TTAAGCCGTG GCTTCTCGGG CATTCGTTTA GAAGTGATTA ACTTCTTAAT CAGTTTAGTG AACGCCGAAG TCTATCCCTG CGTGCCAGAA AAAGGCTCAG TGGGCGCATC GGGCGATTTA GCGCCACTGG CGCACATGTG TCTGCCTATG CTGGGCGAAG GCGAGATGAG CTATCGAGGT GAGTTAATTT CCGCCGCCGA AGGTTTAGAA ATCGCCGGCC TTAAGCCAAT CGATTTAGCG GCCAAAGAAG GGCTCGCTTT GCTTAATGGT ACACAAGCCT CGACTGCGCT GGCGTTAGAA GGGTTATTCC ACGCCGAAGA CTTGTTTGCT GCGAGTTCAG TGATCGGCGC CATGAGTGTT GAAGCGGCGA TGGGCAGTCG TAGCCCGTTC GATCCTCGCA TCCATGCAGC CCGTGGTCAG AAAGGTCAAA TCGATTCGGC CATGATTTTC CGTCATCTAT TGGGCGAAGA GTCTGAGATC AGCGTGAGCC ATGCAAACTG TGAAAAGGTG CAAGATCCTT ACTCACTGCG CTGTCAGCCA CAGGTACTCG GTGCTTGCTT GACCCAAATT CGTCACGCGG CCGATGTGTT AGGCACTGAA GCTAATGGCG TAACCGATAA CCCACTGGTG TTCCAAGACA CGGGCGATAT CATTTCGGGC GGTAACTTCC ACGCTGAACC TGTGGCTATG GCGGCGGATA ATCTGGCGAT TGCAATTGCC GAACTGGGTT CTATTGCTGA GCGTCGTATC GCACTGTTAA TCGATTCTAG CCTGTCGAAA CTGCCGCCTT TCCTGGTGAA AAACGGCGGT GTGAACTCAG GCTTTATGAT CGCTCAAGTG ACAGCGGCAG CTTTGGCGTC TGAGAACAAA ACCTACGCCC ATCCAGCATC GGTAGATAGT TTACCAACAT CGGCTAACCA AGAAGATCAC GTCTCTATGG CGACTTTTGC GGCCCGTCGT TTACGCGATA TGAGTGAAAA CACTCGTGGT GTACTGGCAA TTGAATTGTT AGCGGCGGCG CAGGGTTTAG ATTTTCGCGC ACCTTTAGCC CCAAGTACTG CGGTGGCTAA GGCCAAAACT GAATTGCGTG AAGTCGTCGC CTATTACGAT AAAGACAGGT ACTTCGCACC AGATATCGAA GCCGCGACAG ACCTGTTATA CACAGCAAGC TTTAACGCTT ACCTGCCAGC AGGAACGCTA GCGAGCTTTT AA
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Protein sequence | MKSVNHLVLT PGSLSLAQLR EISRHKLTLE LAPEAITDIN TSAQIVQKVL DEGRTVYGIN TGFGLLANTK IAPEDLQLLQ RSIVLSHAAG TGQYMQDATV RLMMVLKINS LSRGFSGIRL EVINFLISLV NAEVYPCVPE KGSVGASGDL APLAHMCLPM LGEGEMSYRG ELISAAEGLE IAGLKPIDLA AKEGLALLNG TQASTALALE GLFHAEDLFA ASSVIGAMSV EAAMGSRSPF DPRIHAARGQ KGQIDSAMIF RHLLGEESEI SVSHANCEKV QDPYSLRCQP QVLGACLTQI RHAADVLGTE ANGVTDNPLV FQDTGDIISG GNFHAEPVAM AADNLAIAIA ELGSIAERRI ALLIDSSLSK LPPFLVKNGG VNSGFMIAQV TAAALASENK TYAHPASVDS LPTSANQEDH VSMATFAARR LRDMSENTRG VLAIELLAAA QGLDFRAPLA PSTAVAKAKT ELREVVAYYD KDRYFAPDIE AATDLLYTAS FNAYLPAGTL ASF
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