| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0103 |
|---|
| Symbol | |
|---|
| ID | 7087368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 119354 |
|---|
| End bp | 120895 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643459027 |
|---|
| Product | histidine ammonia-lyase |
|---|
| Protein accession | YP_002356067 |
|---|
| Protein GI | 217971316 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2986] Histidine ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTG TGAATCACTT AGTGTTAACG CCGGGTAGCT TGAGCCTAGC GCAATTACGC
GAAATCAGCC GCCATAAGCT GACACTCGAA CTCGCGCCAG AGGCCATTAC CGACATCAAC
ACCAGCGCGC AAATCGTGCA AAAAGTGTTA GATGAAGGCC GCACCGTTTA CGGCATCAAC
ACGGGTTTTG GCTTGTTGGC CAATACCAAG ATAGCGCCCG AAGATCTGCA ATTGCTGCAA
CGCTCAATCG TGTTGTCGCA CGCCGCAGGT ACGGGCCAAT ACATGCAAGA CGCCACAGTA
CGTTTGATGA TGGTGTTAAA AATCAATTCA TTAAGCCGTG GCTTCTCGGG CATTCGTTTA
GAAGTGATTA ACTTCTTAAT CAGTTTAGTG AACGCCGAAG TCTATCCCTG CGTGCCAGAA
AAAGGCTCAG TGGGCGCATC GGGCGATTTA GCGCCACTGG CGCACATGTG TCTGCCTATG
CTGGGCGAAG GCGAGATGAG CTATCGAGGT GAGTTAATTT CCGCCGCCGA AGGTTTAGAA
ATCGCCGGCC TTAAGCCAAT CGATTTAGCG GCCAAAGAAG GGCTCGCTTT GCTTAATGGT
ACACAAGCCT CGACTGCGCT GGCGTTAGAA GGGTTATTCC ACGCCGAAGA CTTGTTTGCT
GCGAGTTCAG TGATCGGCGC CATGAGTGTT GAAGCGGCGA TGGGCAGTCG TAGCCCGTTC
GATCCTCGCA TCCATGCAGC CCGTGGTCAG AAAGGTCAAA TCGATTCGGC CATGATTTTC
CGTCATCTAT TGGGCGAAGA GTCTGAGATC AGCGTGAGCC ATGCAAACTG TGAAAAGGTG
CAAGATCCTT ACTCACTGCG CTGTCAGCCA CAGGTACTCG GTGCTTGCTT GACCCAAATT
CGTCACGCGG CCGATGTGTT AGGCACTGAA GCTAATGGCG TAACCGATAA CCCACTGGTG
TTCCAAGACA CGGGCGATAT CATTTCGGGC GGTAACTTCC ACGCTGAACC TGTGGCTATG
GCGGCGGATA ATCTGGCGAT TGCAATTGCC GAACTGGGTT CTATTGCTGA GCGTCGTATC
GCACTGTTAA TCGATTCTAG CCTGTCGAAA CTGCCGCCTT TCCTGGTGAA AAACGGCGGT
GTGAACTCAG GCTTTATGAT CGCTCAAGTG ACAGCGGCAG CTTTGGCGTC TGAGAACAAA
ACCTACGCCC ATCCAGCATC GGTAGATAGT TTACCAACAT CGGCTAACCA AGAAGATCAC
GTCTCTATGG CGACTTTTGC GGCCCGTCGT TTACGCGATA TGAGTGAAAA CACTCGTGGT
GTACTGGCAA TTGAATTGTT AGCGGCGGCG CAGGGTTTAG ATTTTCGCGC ACCTTTAGCC
CCAAGTACTG CGGTGGCTAA GGCCAAAACT GAATTGCGTG AAGTCGTCGC CTATTACGAT
AAAGACAGGT ACTTCGCACC AGATATCGAA GCCGCGACAG ACCTGTTATA CACAGCAAGC
TTTAACGCTT ACCTGCCAGC AGGAACGCTA GCGAGCTTTT AA
|
|---|
| Protein sequence | MKSVNHLVLT PGSLSLAQLR EISRHKLTLE LAPEAITDIN TSAQIVQKVL DEGRTVYGIN
TGFGLLANTK IAPEDLQLLQ RSIVLSHAAG TGQYMQDATV RLMMVLKINS LSRGFSGIRL
EVINFLISLV NAEVYPCVPE KGSVGASGDL APLAHMCLPM LGEGEMSYRG ELISAAEGLE
IAGLKPIDLA AKEGLALLNG TQASTALALE GLFHAEDLFA ASSVIGAMSV EAAMGSRSPF
DPRIHAARGQ KGQIDSAMIF RHLLGEESEI SVSHANCEKV QDPYSLRCQP QVLGACLTQI
RHAADVLGTE ANGVTDNPLV FQDTGDIISG GNFHAEPVAM AADNLAIAIA ELGSIAERRI
ALLIDSSLSK LPPFLVKNGG VNSGFMIAQV TAAALASENK TYAHPASVDS LPTSANQEDH
VSMATFAARR LRDMSENTRG VLAIELLAAA QGLDFRAPLA PSTAVAKAKT ELREVVAYYD
KDRYFAPDIE AATDLLYTAS FNAYLPAGTL ASF
|
|---|
| |