Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0060 |
Symbol | |
ID | 7087325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 70201 |
End bp | 71445 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643458987 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002356027 |
Protein GI | 217971276 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00890] Oxalate/Formate Antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAG AGATGAACCG TACTCGGTAC CTGACCTTAG TTGGTACTAT TATCACCCAG TTTGCACTCG GCTCAGTTTA CACTTGGAGC CTGTTCAATG CGCAGTTGGC CGTTAAGCTC GACGAACCCG TCAGCCAAGT GGCGTTTGTG TTTGGTTTGC TGAGTTTGTC TTTGGCCGTG GCATCTTCCA TGGCGGGCAA ATTACAGGAA CGTTTTGGCG TACGTAATGT CACCTTAGGC GCAGGCCTGT TACTCGGCGT TGGATTCTTA CTCACTGCTC AAGCCAGTAA CTTGATGATG CTTTACCTGT GCGCAGGGAT TTTAGTGGGC TTTGCCGATG GCACTGGCTA CTTGATGACT TTATCTAACT GCGTGAAGTG GTTCCCCGAA CGCAAAGGGC TGATTTCGGC GTTAGCGATT GGCGCTTATG GTTTAGGTAG CCTCGGATTT AAGTACATCA ACGTGCTGTT ACTCGAAAAT ACTGGCCTTG AAACCACCTT CCAACTGTGG GGCTTAATCG CCATGGCGCT GGTGTTGTGT GGCGGCATGT TGATGAAAGA TGCGCCAGCA CAATCAGCCG CAAGTCAGCT GGCCGAAAGC CGCGACTTCA CCCTCGCAGA AGCCATGCGT AAACCACAAT ACTGGATGTT GGCGCTGATG TTCCTGTCGG CCTGTATGAG TGGTTTGTAT GTGATTGGTG TGGCTAAAGA TATCGGCGAG AAGATGGTCG ACTTGCCTGT ACTGGTCGCC GCCAATGCTG TTGCTGTGAT TGCTATGGCG AACCTCAGTG GTCGTTTAGT GCTGGGTATA CTGTCGGACA AAATCCCTCG TATTCGCGTT ATTTCACTGG CGCAGATCAT CACCTTAGTC GGTATGGTGT TACTACTGTT TGTACCTTTG AATGCTAACC TGTTCTTCGT TGCCGTTGCC TGCGTTGCCT TTAGTTTTGG TGGCACTATT ACTGTTTATC CCTCACTGGT GAGCGACTTC TTCGGCCTGA ATAACCTAAC TAAAAACTAT GGGGTTATCT ACTTAGGTTT TGGTGTCGGC AGCATTATCG GTTCGATTGT CGCCTCGTTA TTCGGTGGTT TTATTGCGAC CTTCAACGTG ATTTTAGTGC TGCTGGTGGT GGCGTTAGTG ATGTCATTAA CCATACGTAT GCCAGAGCCT AAAACCCCAG TGTCAGCCAA GAAAGCCACT AAGAGTACAC CGCGCTTAGT GAACATGACG GCAGAATCGG CGTAA
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Protein sequence | MTKEMNRTRY LTLVGTIITQ FALGSVYTWS LFNAQLAVKL DEPVSQVAFV FGLLSLSLAV ASSMAGKLQE RFGVRNVTLG AGLLLGVGFL LTAQASNLMM LYLCAGILVG FADGTGYLMT LSNCVKWFPE RKGLISALAI GAYGLGSLGF KYINVLLLEN TGLETTFQLW GLIAMALVLC GGMLMKDAPA QSAASQLAES RDFTLAEAMR KPQYWMLALM FLSACMSGLY VIGVAKDIGE KMVDLPVLVA ANAVAVIAMA NLSGRLVLGI LSDKIPRIRV ISLAQIITLV GMVLLLFVPL NANLFFVAVA CVAFSFGGTI TVYPSLVSDF FGLNNLTKNY GVIYLGFGVG SIIGSIVASL FGGFIATFNV ILVLLVVALV MSLTIRMPEP KTPVSAKKAT KSTPRLVNMT AESA
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