| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0039 |
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| Symbol | aroE |
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| ID | 7089251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 42181 |
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| End bp | 43029 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643458963 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002356006 |
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| Protein GI | 217971255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0451521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000512206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACAGACA GATACGCAGT GTTTGGCAAT CCAATTAGCC ACAGTAAATC GCCGTTCATC
CATGGACAAT TTGCCGCGCC CACCCAAGAG TCATTAACCT ATGAAGCCAT TCTCGCTCCG
GTCGATGGTT TTGAAGCCTC ATTGACGGCG TTTTTCAATG CGGGCGGCAA GGGCGCAAAT
GTGACCGTGC CTTTTAAGGA GCAAGCTTTT GCGCTGTGTG ACAGTATCAG CCCCGAAGCC
AAACTCGCTG GCGCAGTCAA CACCTTAAGT TTATTGGCCG ATGGCACTAT TCGCGGTGAT
AACACCGACG GTTTAGGGCT GGTGGCCGAT CTCATCGCTA ACTTAGGCAG CTTGCAAGAT
CAGCGCGTGT TACTCATTGG CGCTGGTGGC GCGGCGCGCG GTTGTATTCT GCCGTTATTA
AATGCGGAGA TTGCACAACT GACCATCAGC AATCGCACCC ACACAAAGGC GCAGCTTTTA
GTCGATATCT TTACTTCTGT GGATAACGGC GCTTACGCGA GTAAAGTCAC CGCCGTAGAA
ATGAGTGAGC TTGCGGGTGA GTTCGATATC ATTATTAATT CAACCTCTGC TAGCCTTGCG
GGCGAGTTGC CACCTTTGCC AGCACATATC ATCACCACCC AAACCGTTTG TTATGACATG
ATGTATGGCG CCTCGATCAC CGCGTTTAAC CAATGGGCAC TCTCCCAAGG TGCAGCGAAA
GTCATTGATG GGCTAGGTAT GTTAGTCGGA CAAGCGGCCA AGAGTTTTAC CTTATGGCGA
GGTATTGAGC CCGACACCCA AGTGGTGTTG ACGCTTTTGC GGGACAAACT AATGGCAGAG
CCTAAGTAG
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| Protein sequence | MTDRYAVFGN PISHSKSPFI HGQFAAPTQE SLTYEAILAP VDGFEASLTA FFNAGGKGAN
VTVPFKEQAF ALCDSISPEA KLAGAVNTLS LLADGTIRGD NTDGLGLVAD LIANLGSLQD
QRVLLIGAGG AARGCILPLL NAEIAQLTIS NRTHTKAQLL VDIFTSVDNG AYASKVTAVE
MSELAGEFDI IINSTSASLA GELPPLPAHI ITTQTVCYDM MYGASITAFN QWALSQGAAK
VIDGLGMLVG QAAKSFTLWR GIEPDTQVVL TLLRDKLMAE PK
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