Gene Sbal223_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0031 
Symboldef 
ID7089243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp35901 
End bp36413 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content44% 
IMG OID643458955 
Productpeptide deformylase 
Protein accessionYP_002355998 
Protein GI217971247 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000164435 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACAAT TAAAAGTATT ACAATTTCCT GACGAAAGAT TGCGGACACA AGCCACACCC 
ATCACAGAGT TTAATGCCGA GCTGCAAACT CAAATTGATG ATATGTTCGA AACCATGTAC
CAAGAAAAAG GTATCGGTCT GGCCGCGACC CAAGTGGATT ACCATAAACA ACTTATTGTC
ATGGACTTAC AAGATGAAGT CGAACGACCT AAAGTGTTTA TTAATCCCGA AATTATCGCC
AGCAGCGGCG ACTTCTGCAA TGAAGAAGGT TGTCTGTCGG TGCCGGGCAT TTATGCCAAA
GTCGATCGCG CCGAATTTGT TACGGTAAAA GCCTTAGACA GGCACGGCAA CGAATTTATT
GTTGAGGCCG ATGAGCTTTT TGCTATCTGT ATTCAACACG AAATGGATCA CCTCAAAGGC
AAATTGTTTG TCGATTATCT GTCGCCGCTA AAACGTCAGC GGATCAAACA AAAACTTGAA
AAAGCGGCCC GATTGGACGC CAAAGAAGCA TAG
 
Protein sequence
MAQLKVLQFP DERLRTQATP ITEFNAELQT QIDDMFETMY QEKGIGLAAT QVDYHKQLIV 
MDLQDEVERP KVFINPEIIA SSGDFCNEEG CLSVPGIYAK VDRAEFVTVK ALDRHGNEFI
VEADELFAIC IQHEMDHLKG KLFVDYLSPL KRQRIKQKLE KAARLDAKEA