| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0020 |
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| Symbol | fadB |
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| ID | 7089232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 22898 |
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| End bp | 25048 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643458944 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_002355987 |
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| Protein GI | 217971236 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000356561 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG
TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACCCTCGC CTCGCTCGAT
GCGGCATTAG ACAGCATCAA GCAAGATTCC AATATCAAAG CGTTAGTGCT GACCTCAAGT
AAAGATACCT TTATTGTGGG CGCCGACATT ACCGAATTTT TAGGCCTGTT CGCACAAGAT
GACGCCGTAT TGCTCTCTTG GGTTGAACAA GCCAACGCAG TCTTCAACAA ACTCGAAGAC
TTGCCTTTCC CAACTGCATC AGCAATCAAA GGCTTTGCCT TAGGTGGCGG CTGTGAAACC
ATTCTGACAA CCGATTTCCG TATCGCAGAC ACCACAGCCA AAATCGGTTT ACCTGAAACT
AAACTCGGCA TCATCCCAGG TTTTGGCGGC ACAGTTCGTC TGCCACGTGT GATTGGTGCA
GATAACGCAC TTGAGTGGAT CACCACAGGT AAAGACCAAC GCGCTGAAGA TGCACTGAAA
GTCGGCGCTG TTGATGCCGT GGTTGCACCA CAAGCGTTAG AAGCTGCTGC GATTCAAATG
CTGAAAGATG CTGTTGCTGA AAAGCTGGAT TGGCAAGCAC GTCGTAACCG TAAACTGTCT
GCACTAACAC TGCCAAAACT TGAAGCTATG ATGTCATTCA CCACAGCCAA AGGCATGGTG
TTTGCGGTTG CGGGTAAACA CTACCCTGCA CCAATGGCTG CTGTAAGCGT GATTGAGCAA
GCATCGACTA AAGGTCGTGC TGAAGCATTA CAAATCGAAC ATCAAGCCTT TATCAAGCTG
GCTAAAACTG ACGTTGCTAA GGCACTTATC GGTATTTTCC TTAACGATCA ATTCGTTAAA
GGTAAAGCGA AGAAAGCTGG CAAGTTAGCG AAAGAAGTCA ACAACGCGGC CGTATTAGGT
GCAGGCATTA TGGGCGGCGG CATCGCTTAC CAAAGCGCCA GCAAAGGCAC ACCGATTGTC
ATGAAAGACA TTGCCCAGCC AGCATTAGAT TTAGGCCTCA ATGAAGCCGC TAAACTGCTG
TCTGCCCAAG TCGCCCGTGG CCGTTCAACG CCAGAAAAAA TGGCCAAAGT GCTGAACAAC
ATTACGCCTT CGTTAGATTA TGCCGCGATT AAACACAGTG ATGTTGTCGT TGAAGCCGTT
GTTGAACATC CAAAAATCAA AGCACAGGTT TTAGCCGAAG TTGAAGGTTA TGTGAGTGAA
GATGCAATTA TCGCCTCAAA CACTTCAACG ATTTCAATCA ACTTGCTCGC TAAGAGCATG
AAGAAACCAG AGCGTTTCTG CGGTATGCAT TTCTTCAACC CAGTGCACAA AATGCCTTTG
GTCGAAGTGA TCCGTGGCGA GCACAGCTCT GAAGAAACCA TCGCCTCTGT TGTGGCTTAT
GCCAGCAAAA TGGGTAAGAC CCCAATCGTT GTTAATGATT GCCCAGGCTT CTTCGTTAAC
CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCTTAC TTGCCGAAGG TGGCGACTTT
GCTGCAATAG ACAAAGTGAT GGAAAAACAA TTCGGTTGGC CAATGGGTCC AGCTTACCTG
CTCGACGTAG TCGGTTTAGA CACAGGTCAT CACGCCCAAG CTGTAATGGC TGAAGGTTTC
CCTGATCGCA TGGGTAAATC TGGTACTGAC GCGATTGATG TGATGTTTGA GAACAAACGT
CTTGGCCAGA AAAATGGCAA AGGTTTCTAT GTCTATTCCG TCGATAGCCG TGGCAAGCCG
AAGAAAGATG TCGATCCAAC AAGCTACGGT CTATTGAAAG ATGCCTTTGG CGAGTTAAAA
GCCTTCGAAG CCGATGACAT TATTGCCCGT ACTATGATCC CTATGATCAT TGAAACCGTG
CGCTGTTTAG AAGAAGGTAT TGTCGCATCG CCTGCCGAAG CGGATATGGG CCTAGTTTAT
GGCTTAGGAT TCCCGCCATT CAGAGGCGGC GTGTTCCGTT ACTTGGATAC CATGGGTGTC
GCAAACTTTG TGGCCTTAGC AGACAAATAC GCTCACTTGG GCGGTCTGTA TCAAGTCACA
GATGCGATGC GCACATTAGC AGCCAATAAC GGTAGCTACT ACCAAGCCTA A
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| Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQDS NIKALVLTSS
KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET
ILTTDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG KDQRAEDALK
VGAVDAVVAP QALEAAAIQM LKDAVAEKLD WQARRNRKLS ALTLPKLEAM MSFTTAKGMV
FAVAGKHYPA PMAAVSVIEQ ASTKGRAEAL QIEHQAFIKL AKTDVAKALI GIFLNDQFVK
GKAKKAGKLA KEVNNAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL
SAQVARGRST PEKMAKVLNN ITPSLDYAAI KHSDVVVEAV VEHPKIKAQV LAEVEGYVSE
DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKSGTD AIDVMFENKR LGQKNGKGFY VYSVDSRGKP
KKDVDPTSYG LLKDAFGELK AFEADDIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRTLAANN GSYYQA
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