Gene Tmz1t_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_4083 
Symbol 
ID7873310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4485129 
End bp4486376 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content70% 
IMG OID643701014 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002891037 
Protein GI237654723 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA TTCTGATCGT TGACGACGAA ATCGGCATCC GCGAACTGCT CTCGGAGATC 
CTCCGCGACG AGGGGCACGA CATCCTGCTC GCCGAGAATG CCACCGCCGC GCGCGCAGCA
CGCAACGCAG TGCGTCCGGA CATGGTGTTG CTCGACATCT GGATGCCCGA CACCGACGGC
ATCACCCTGC TCAAGGAATG GGCGGCCAAT GGCCAGCTCA ACATGCCGGT GGTGATGATG
TCGGGGCACG GCACCATCGA CACCGCGGTC GAGGCCACCC GCATCGGCGC GATCGACTAT
CTGGAAAAGC CGATCGCGCT GCAGAAGCTG CTCGCCGCGG TCAAGCGCGG GCTGCAGCGT
CCGCAGGCGC CCGGCGTGCA GTCGGCACCG ACACTCGCCG CCTTTCATCG CTCCGTGCCC
TTGCGCGAGC TGCGCCGCCG GCTCGAGCAG ATCGTCGGCA GTTCTCGCGT GCTGCTGCTG
CGCGTCGGCG CGGGGTCGCT CGCCGAACTG GTCGCACGCA GCGTGCAACC CGCCAACGCC
CCCTGGCTCG ACCTCGCCGC CGTCACCGCG CCGCTCGACA TCACCCAGTT GCAGTCCACC
CAGGGCGGCG TGGTGTTCGT CGGCGAGCTG GCCCGCCTGT CGCGCGCGCA GCAAAAGAAC
CTCGCCTTCG CGCTCGACCG CCTCGAGCGC TACGACTTGC GCCTCGTCGT CGCCACCGAC
CGCAGTCTCG AGGCCCTGGT CGGCGAGGGC TGGGAGGAGG GGCTGCTCGC CCGCCTGTTC
GAGGTGAGCC TCGCGCCGCC CTCGATCGCC GACGTCCGCG AGGACCTGCC CGAGCTCGCC
AGCCAGATGC TGCTGCATCT GGTGGAGGCG GGTGAAGTGC CGCTGCGGCG CTTTTCCACC
GCCGCGCTCA ACCAGCTGCG CAACCTGCCG TGGCCGGGGG GCTACCCCGA GTTGCGCGCC
GCGGTGAAGT CGCTCGCGCT CGGCACGCTG GAGGAGGAGA TCGGCGCCGG CGAAGTGCGT
CGCCTGCTGC CACCGGATCT GGGCGCCGGC GCCTGCGGCG TGTCGCTCGA CCAGCCGCTG
CGAGAGGCGC GCGAGGCCTT CGAGCGCATG TACTTCGAAC ATCATCTGCG CCTCGAGGGC
GGCAACATGA CCCGCCTGGC GGAGAAGACC GGCCTGGAGC GCACCCACCT CTACCGCAAG
CTCAAGCAAC TCGGCCTGCA GGCCGGGCGC CGGCACGAGG AGTCCTGA
 
Protein sequence
MAKILIVDDE IGIRELLSEI LRDEGHDILL AENATAARAA RNAVRPDMVL LDIWMPDTDG 
ITLLKEWAAN GQLNMPVVMM SGHGTIDTAV EATRIGAIDY LEKPIALQKL LAAVKRGLQR
PQAPGVQSAP TLAAFHRSVP LRELRRRLEQ IVGSSRVLLL RVGAGSLAEL VARSVQPANA
PWLDLAAVTA PLDITQLQST QGGVVFVGEL ARLSRAQQKN LAFALDRLER YDLRLVVATD
RSLEALVGEG WEEGLLARLF EVSLAPPSIA DVREDLPELA SQMLLHLVEA GEVPLRRFST
AALNQLRNLP WPGGYPELRA AVKSLALGTL EEEIGAGEVR RLLPPDLGAG ACGVSLDQPL
REAREAFERM YFEHHLRLEG GNMTRLAEKT GLERTHLYRK LKQLGLQAGR RHEES