| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4051 |
|---|
| Symbol | |
|---|
| ID | 7873279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4451706 |
|---|
| End bp | 4453073 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643700983 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_002891006 |
|---|
| Protein GI | 237654692 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGG TGGCGGAGGG CCTGCGCGTG CACTTCACCG CCTGCCGGAA TCGTTCCCCG
ATGAAACCCA CATTCGCAGT ATCCTCCTCC CGCCTGCCAC GCCCCGCAGC GCTCGCGCTG
GTGTTCGCGC TCACGTTGGG AAGCAGTCAT GCCTGGACGC AAGGCGTGCC CGACACCCCG
ACGCTCGGCG CGAGCCCCCA GGCGCTGATC GAGTATGCGC GCCAGAGCAA CCCCGGCTTT
GCCGCGGCCC GTGCGGAAGC GTCCGCCGCC CAGGAGCGCG TCACCCCTGC CGGCGCACTG
CCCGATCCCA CCTTCGAGAT CGAGCTCATG GATGCCACCA ACACCATGAG CGGACGTTCG
GCCTCGCTGT TGCCCGGCCA GGTGGGTGAA ACGCGCTACC GCATCACCCA GCCCTTGCCG
GGGTGGGGCA AGCGCGACCT CGCGGTGAAG GCCGCCGAGG CGCAGGCCAC CCAGGCCGAT
GCGATGCGCG ACGCCTCCTG GGCCGAGCTC GCGGCAAAGA TCGAGACGCT GTGGTTGCGC
TACTACGCGG CCGACCGGGA GCGCGTCCTC AACCGCGAGG GCCTGACCCT GCTGCAAAGC
CTGGAGGAAC TCAGCCTGGC TCGTTACGAG CTGGGTCTGC TGCCGCAGCA GGCGGTGTTG
CGCATGCAGC GCGAAATCAC TGCCCAGCGC CTCGCGCTCG TGGAGGTCGA ACAGCGGCGC
AAGGGCCTGG CAGCGGGGCT CAACGGCCTG CTCGGGCGGG CGCACGACGC TCCACTGGCC
GCGCCTGCCA ATCCCGCCCC CTTGCCCGAG CAGCTGGAAG CTGGCGCCCT TTTCAAGGCG
GCGGCCAGCG CCAACCCGGA CGTGAATGCG GCCGCCTACG GCATCGACGT GGCGCGTGCC
GAGCGCGAAC GGACCTATCA GGACCGCTTG CCGGACTTCG CCGTGGGCGT GCGCAACAAC
CGTCCCGATG AGGGCAAGGC CTCGTGGGAC GTGATGTTCG AGGTCATGAT CCCGCTGCAG
CAGTCCAGCC GTCGCGCCCG GGAGCGCGAA GCCGAGTACA TGCTGATCGC CGCCGAAGCG
CGTCGCGAGG ACGCCAGGGC GCGCGCTTCC GGAGAACTCG GCACTGCATG GTCCATGTAT
GCGCAGGGCC GCGAGACCTT GCGCCTGCTC GAACACACGC TGCTGCCGCA GGCCCGGGCC
ACGCGCGATG CCAGCCGGGC GGCACTCGCC AGCGGCACGG TCGATTTCGA CAGCGTCATC
GAAGCCGAGC GCCAGCTCAT CGACATCCGC ATGCGCCAAC TCCAGACCGA GCTCGAGACC
CGGCTGGCGC TGACCGAGAT CAGGAAATTG ACAGGGGAAT TGAATTGA
|
|---|
| Protein sequence | MRRVAEGLRV HFTACRNRSP MKPTFAVSSS RLPRPAALAL VFALTLGSSH AWTQGVPDTP
TLGASPQALI EYARQSNPGF AAARAEASAA QERVTPAGAL PDPTFEIELM DATNTMSGRS
ASLLPGQVGE TRYRITQPLP GWGKRDLAVK AAEAQATQAD AMRDASWAEL AAKIETLWLR
YYAADRERVL NREGLTLLQS LEELSLARYE LGLLPQQAVL RMQREITAQR LALVEVEQRR
KGLAAGLNGL LGRAHDAPLA APANPAPLPE QLEAGALFKA AASANPDVNA AAYGIDVARA
ERERTYQDRL PDFAVGVRNN RPDEGKASWD VMFEVMIPLQ QSSRRARERE AEYMLIAAEA
RREDARARAS GELGTAWSMY AQGRETLRLL EHTLLPQARA TRDASRAALA SGTVDFDSVI
EAERQLIDIR MRQLQTELET RLALTEIRKL TGELN
|
|---|
| |