Gene Tmz1t_4034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_4034 
Symbol 
ID7873679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4430891 
End bp4432549 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content53% 
IMG OID643700970 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002890993 
Protein GI237654679 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1021] Peptide arylation enzymes 
TIGRFAM ID[TIGR02275] 2,3-dihydroxybenzoate-AMP ligase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCGG GACATGTGCC TCTACCGCAG GATTTTGCAG AGCTTTATCG CAAGAAAGGC 
TACTGGGAAA ACATCGGCGT CACGGAGATG GTCAAGCGCA CGGTCGAGCG GCATTCAAAT
AAAGTGGCCC TAGTGGCGGG GATAAATCGC ATTACCTACC AATTCTTGTA TCAGGCCATT
GAGCGTCTGG CCTGTAGATT TACTGAAGCA GGTTTGCGCC CGCTTGATCG GGTTATCCTC
CAGTTACCCA ATACGCCTGA ACTCATCTAT GCATATCTTG CACTCACGCG CATCGGCGCG
ATTCCCGTCA TGGCGTTGCG GGCACATCGC GAAACCGAAA TCAGGCATTT CATAAATGCT
TCCGGGGCAG TGGCGTATGT GATCCCCGAT CAGGTCAATC ATTTCGACTA TCGCGTGATG
GCCGATACAT TACGCGAAGA GTGCTCTAGC CTTCGGTACA TCTTCGTCGC TGGCACCCCG
AGAGATGGGC AAGCCTCACT CAGTGAAATG ATCAATGAGG AACGAACCGC GCCTCAAATC
GCGGCTGCAC TGGGTTCAAT CAGGGTCGAT CCGACCGACG TCGCGACTAT GCTCCTGTCG
GGCGGCACCA CCTCAATCTC CAAGTTGATC CCACGCACGC ATAACGACTA CGTGCTAAAT
GCCCGCCTCT GCGGAGAAGC CGCAAGCCTC GACGAACAGA CTGTTTTCAT GGCAATCCTG
CCATTGGGCC ATAACTACAA TCTAGCCTGC CCTGGCTTTC TTGGTACGTT CTATTACGGC
GGCACGGTGG TGCTTGCTCC CTCCGGTGAC GCCAATGAAG TGTTCTCCTT GGTCGAAAGG
GAAAAGGTCA CGGTCATCGC GGCGGCGGTT CCGCTAATTA CAACTTGGCT GAACTCGAAT
ACATACGAAC GCTATGACCT GTCCTCGCTC CGAATCATTC AGAATGGCGG CGCACGACTT
GCGCCAGAAC TGCGTAAGCG AATCTTGCAA CAACTTGGCT GTTTCCCACA GGAGATCTAC
GGTACTGCTG AGGGGTTGAT CAACATGACG CGCCTTGGAG ACGCGGAGCG GGCGGTTATC
GAAAGCTCAG GCTCTCCGGT GTGCGAGGAC GACGAGATCA AGGTCGTTGA CGAATTCGGA
GACGAAGTTC CTGACGGCGA AGCCGGTGAA CTTGCCACTC GTGGTCCCTA CACGATCCGC
GGCTACTTCA ATGCACCGGA AATAAACAGC GCCGCTTTTA CAAAGGATGG CTTTTACCTG
ATGGGCGATA TCGTTCGCAA AGAGGGCCGT TTTGTTTTTG CCGAAGGCCG GAAAAAGGAT
TTTATCAACC GCGGCGGCGA AAAAATAAGT TGCGAGGAAG TCGAGAATTT GATTCTGCAG
CACCCAAAGG TATTTCAGGT TTCGCTGGTG GCCATGCCGG ACGACACTTT CGGTGAGAAG
GCTTGCGCAT TCGTTCGCCC GCGAGCCGAT GAGACCCTTG GATTCGAGGA GCTTATCCAT
TTTCTTCGAT CAAAAAAAAT TGCAAGCTTC AAGCTTCCCG AGCGCCTCGA GATTATTGAA
GCTTTTCCTG TAAGCCCCGT GGGTAAAATT CTAAAGCGAC AGTTGCGCGA GATTATCGCC
GCAAGAATTA CAACAGAAAA AATCGCCGCC AAGAATTAA
 
Protein sequence
MLSGHVPLPQ DFAELYRKKG YWENIGVTEM VKRTVERHSN KVALVAGINR ITYQFLYQAI 
ERLACRFTEA GLRPLDRVIL QLPNTPELIY AYLALTRIGA IPVMALRAHR ETEIRHFINA
SGAVAYVIPD QVNHFDYRVM ADTLREECSS LRYIFVAGTP RDGQASLSEM INEERTAPQI
AAALGSIRVD PTDVATMLLS GGTTSISKLI PRTHNDYVLN ARLCGEAASL DEQTVFMAIL
PLGHNYNLAC PGFLGTFYYG GTVVLAPSGD ANEVFSLVER EKVTVIAAAV PLITTWLNSN
TYERYDLSSL RIIQNGGARL APELRKRILQ QLGCFPQEIY GTAEGLINMT RLGDAERAVI
ESSGSPVCED DEIKVVDEFG DEVPDGEAGE LATRGPYTIR GYFNAPEINS AAFTKDGFYL
MGDIVRKEGR FVFAEGRKKD FINRGGEKIS CEEVENLILQ HPKVFQVSLV AMPDDTFGEK
ACAFVRPRAD ETLGFEELIH FLRSKKIASF KLPERLEIIE AFPVSPVGKI LKRQLREIIA
ARITTEKIAA KN