Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_4017 |
Symbol | |
ID | 7873663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 4414948 |
End bp | 4417155 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643700954 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_002890977 |
Protein GI | 237654663 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.649623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCG CCGAAGCAGG CCCAGCCCCC GAAGTCTTCC GCCCGCCGGT GTCGAGCGTG CTCGCGCTCG ACTTCCAGCA GCTCAAGACC AAGCTGCAGA CCTACCTCCG GCCCGAGGAC GTGGGCCGCG TCGAGGCGGC CTACCACTTC TCCGCCGATG CCCACGCCGG CCAGTTCCGC GTCAGCGGCG AGCCCTATGT CAGCCACCCG GTGGCGGTGT GTTCGCTGGT CGCCGACTGG CACCTCGACC CGCAGGCGCT GATCGCCGCG CTCCTCCACG ACGTGATGGA GGACACCCAC ATCACAAAGG CGGAGATCGC CGAGCGCTTC GGCAAGGTCT CCGCCGAACT CGTCGACGGC CTCTCCAAGC TCGACAAGAT CGAGTTCCGC TCGCAGGAAG AGGCGCAGGC GGAGAACTTC CGCAAGATGC TGCTGGCGAT GGCGAGCGAC CTGCGCGTCA TCCTCATCAA GCTCGCCGAC CGTCTGCACA ACATGCGCAC GCTGGACCAC ATGCGTCCGG CCAAGCGCCG CCGCATCGCC AACGAGACGC TCGAGATCTA CGCGCCGATC GCCAACCGGC TCGGGCTCAA CGACCTCTTC CGCGAGCTGC AGGAGCTGTC CTTCCGCAAC AAGTACCCGC TGCGCTTCGA GGTGCTCGCC AAGGCGATCC GCTCGGCGCG CGGCAACCGC CGCGAGGTGG TCGGCAAGAT CCTCGCCAGC ATCGAGGAGC GCCTGCCGCA GTGGGGCATC GCCGCCGAGG TGCAGGGGCG CGAGAAGCAC CTCTACGGCA TCTACCGCAA GATGGTCGAG AAGCACCTGT CCTTCTCGCA GGTGCTCGAC ATCTACGGCT TCCGCGTCAT CGTCAAGGAC GTGCCGAGCT GCTACCTCGC GCTCGGTGCG TTGCACTCGA TGTACAAGCC GGTGCCGGGC AAGTTCAAGG ACTATCTGGC CATCCCCAAG GCCAACGGCT ACCAGAGCCT GCACACCACC CTGATCGGTC CCTTCGGCAT GCCGGTCGAG GTGCAGATCC GCACCCGCGA GATGCACCAC ATCGCCGAGA CCGGCGTGGC CTCGCACTGG CTGTACAAGG AAGACGAGAA GACCCTCACC GAGCTGCAGC AGAAGACGCA CTCCTGGCTG CAGTCCCTGC TCGAGCTGCA GTCGGCCTCG GGCGAGGCCA CCGAGTTCCT CGAGCACGTC AAGATCGACC TCTTCCCCGG CGAGGTCTAC GTGTTCTCGC CCAAGGGCAA GATCTTCTCG ATGCCCAAGG GCTCGACCCC GGTCGACTTC GCCTACGCGG TGCATACCGA CGTCGGCAAT CGCTGCGTTG CCTGCCGCAT CAACGGCGAC CTGATGCCGC TGCGCAGCGA GCTGCGCAAT GGCGACCAGG TCGAGATCAT CACCGCGGCC CACGCCAACC CCAACCCGGC CTGGCTGTCC TACGCGCGCA CCGGCAAGGC GCGCGCGCAG ATCCGCCACT TCATGAAGAA CGCGCAGCAG GACGAGTCGG TCACGCTCGG CGAGCGCCTG CTCAACCAGG CGCTGCGCCC GCACGGGCTC ACCCTCGGGC AGATCTCCAG CTTCGCCTGG GACCGCTTCC TGCGCGACCG CGGCGTGCGC CACAAGAAGG AGGTCTTCTC CGACCTCGGG CTCGGCAAGC GCCTGCCGGT CATCGTCGCG CGCCGCCTCG CCGAGGCGCA GGACCTCGAG TCCGGTCGCC CGGACGTGGT CAAGCCCAAG CCGGCGGGGG CGATCAGCAT CCGCGGCTCG GAAGGTGTGG CGGTGCAGCT CGCGCGCTGC TGCCATCCCA TCCCGGGGGA CCCGATCATC GGCACCCTGC GCAAGGGCCA GGGCCTCGAA GTCCACACCC ACGACTGCCC CAACGTGGCC AAGCTGCGCG GCGACCGCGG GCGCTGGGTG GATGTCGAGT GGGAGCACAT GGTCGACGAC CGCCTGTTCG ACGTCGGCAT CCGCGTGCTC AGCCACAACG CCTGCGGCGT GCTGGCGCGG GTGGCGAGTG CGATCGCCGA GGAGGACAGC AACATCCAGA GCGTCAGCAT GGATGGCGGA CAGGGCGAAT ACACCGCGCT CAACTTCACC GTGCAGGTGC ACGACCGCAT GCACCTGGCG CGCGTGATGC GCGGCGTGCG CAGGGTGCAG GAAGTGGTGC GCATCGGACG CGTCAAGGCC GACGGCCGCG TCGGCTGA
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Protein sequence | MKAAEAGPAP EVFRPPVSSV LALDFQQLKT KLQTYLRPED VGRVEAAYHF SADAHAGQFR VSGEPYVSHP VAVCSLVADW HLDPQALIAA LLHDVMEDTH ITKAEIAERF GKVSAELVDG LSKLDKIEFR SQEEAQAENF RKMLLAMASD LRVILIKLAD RLHNMRTLDH MRPAKRRRIA NETLEIYAPI ANRLGLNDLF RELQELSFRN KYPLRFEVLA KAIRSARGNR REVVGKILAS IEERLPQWGI AAEVQGREKH LYGIYRKMVE KHLSFSQVLD IYGFRVIVKD VPSCYLALGA LHSMYKPVPG KFKDYLAIPK ANGYQSLHTT LIGPFGMPVE VQIRTREMHH IAETGVASHW LYKEDEKTLT ELQQKTHSWL QSLLELQSAS GEATEFLEHV KIDLFPGEVY VFSPKGKIFS MPKGSTPVDF AYAVHTDVGN RCVACRINGD LMPLRSELRN GDQVEIITAA HANPNPAWLS YARTGKARAQ IRHFMKNAQQ DESVTLGERL LNQALRPHGL TLGQISSFAW DRFLRDRGVR HKKEVFSDLG LGKRLPVIVA RRLAEAQDLE SGRPDVVKPK PAGAISIRGS EGVAVQLARC CHPIPGDPII GTLRKGQGLE VHTHDCPNVA KLRGDRGRWV DVEWEHMVDD RLFDVGIRVL SHNACGVLAR VASAIAEEDS NIQSVSMDGG QGEYTALNFT VQVHDRMHLA RVMRGVRRVQ EVVRIGRVKA DGRVG
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