| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4009 |
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| Symbol | |
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| ID | 7873655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 4406084 |
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| End bp | 4408630 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700946 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_002890969 |
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| Protein GI | 237654655 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA ATCGACGCGA ATTCATCAAG AACAACGCGA TCGCCGCGGC GGCCGCCACC
GCCGGCATCG GGATCCCGGT CGTCGCCGAG GCGCAGCAGC CCGGCGCGGG CGGCACCAAG
GTGCGCTGGG ACAAGGCGGC CTGCCGCTTC TGCGGCACCG GCTGCTCGGT GCTGGTGGGC
GTGCAGGACG GGCGCGTGGT CGCCACCCAG GGTGATCCGG ACTCGCCGGT CAACCGCGGC
CTGAACTGCA TCAAGGGCTA CTTCCTGTCC AAGATCATGT ACGGCGAGGA CCGCCTTACC
AAGCCGCTGC TGCGCATGAA GAACGGCCAG TTCGACAAGA ACGGCGAGTT CACGCCGATC
TCGTGGGAGC AGGCCTTCGA CATCATGGAG CAGAAGTGGA AGAAGGCGAT CAAGGAGCAC
GGCCCCGACT CCGTCGCCAT GTTCGGCTCG GGCCAGTGGA CGGTGTGGGA GGGCTATGCC
GCCTCGAAGC TGATGAAGGC CGGCTTCCGC ACCAACAACC TCGATCCCAA CGCGCGCCAC
TGCATGGCGT CGGCGGTGGC CGGCTTCATG CGCACCTTCG GCATCGACGA GCCGATGGGC
TGTTACGACG ACATCGAGAA CGCCGACACC TTCGTGCTGT GGGGCTCGAA CATGGCGGAG
ATGCACCCCA TCCTGTGGAG CCGCATCACC GACCGCCGCC TGTCCAAGCA AGGCTGCCAG
GTGCACGTGC TGTCGACCTT CGAGCATCGT TCCTACGAGC TCGCCGACAA CCCGATGATC
TTCGTGCCGC AGACCGACCT GGCGATCCTC AACTACATCT GCAACTACAT CATCCAGAAC
GGCAAGGTGA ACAAGGCCTT CGTCGAGCGC AACGTCAAGT TCAAGATCGG CGAGACCGAC
ATCGGTTTCG GCCTGCGCCC GAACCATGTG CTGGAAGCCA AGGCCACGAG CAACGGCTAC
CCGGGTGCCG AGGGCAAGCC CAAGGGCGAC ACCGGCGCGG CCAAGGACAT CAGCTTCGAC
GAGTTCGCCA GGTTCGTCTC GGAGTACACC GCCGAGAAGG TGTCGAAGCT TTCGGGCGTG
CCGGAGGATC GCCTGGTCAA GATGGCCGAG CAGTATGCCG ACCCGAACCG CAAGGTGGTG
TCGTTCTGGA CCATGGGCTT CAACCAGCAC ACCCGCGGCA CCTGGGTGAA CAACATGATC
TACAACGTCC ACCTGCTCGT GGGCAAGATC TCGGAGCCCG GCAACAGCCC GTTCTCGCTC
ACCGGTCAGC CCTCGGCCTG CGGCACCGCG CGCGAGGTCG GCACCTTCGC CCACCGCCTG
CCGGCCGACA TGGTGGTCAC CAACCCGATG CACCGCGCGC TCACCGAGGA ATTGTGGAAG
CTGCCCGAGG GCACGATCCC GCCCAAGATC GGTCTGCATG CGGTGGCGCA GAGCCGCGCG
CTCAAGGACG GCAAGCTCAA GTGCTACTGG ACCACGACCA CCAACAACAT GCAGGCGGGC
CCCAACGTCA ATGACGAGAT CTACCCGGGC TGGCGCAACC CGGAGGCCTT CGTGGTGGTG
TCCGACGTCT ATCCGACCGT CTCCGCGCTG TCGGCCGACC TGATCCTGCC GTGCGCGATG
TGGGCCGAGA AGGAAGGCGC CTTCGGCAAC GCCGAGCGCC GCACCCAGTT CTGGCGCCAG
CAGGTGTCGG CGCCGGGCGA GGCCAAGTCC GACCTGTGGC AGTACATCCA GTTCGCCAAG
CGCTTCAAGG TCGAGGAAGT GTGGCCGGAG GAGCTCGTCG CCAAGAAGCC CGAGTACCGC
GGCAAGACCC TGTACGACGT GCTCTACGCC AACGGCCAGG TGAACAAGTT CCCGCTCGCC
GACGTCGAGA AGGCCAACGG GCATGCGATT CCGGGCTACA TGAACGACGA GTCGAAGGAG
CTCGGCTTCT ACCTGCAGAA GGGCTTGTTC GAGGAGTACG CCGCCTTCGG TCGCGGCCAC
GCCCACGACC TCGCCGACTT CGACGTCTAC CACAAGGCGC GCGGCCTGCG CTGGCCGGTG
GTGGACAACA AGGAGACCCT GTGGCGCTTC CGCGAGGGCT ATGACCCGTA CGTGAAGGCG
GGCGAGGGCG TGAAGTTCTA CGGCCACAAG GACAACAAGG CGGTCGTGTT CGCGCTGCCC
TACCAGGATC CGCCCGAGAT GCCCGACGCC GAGTTCGACA TGTGGCTGTG TACCGGCCGC
GTGCTGGAGC ACTGGCACAC CGGCTCGATG ACCCGGCGCG TGCCCGAGCT GCACCGCTCG
GTGCCCGAGG CACAGATCTT CATGCACCCC GAGGACGCGC AGAAGCGCGG CCTGCAGCGC
GGAATGGCGG TCAAGGTGGT GTCGCGGCGC GGCGAGATCG TCGCCCGCCT GGAGACCCGC
GGCCGCAACA AGCCGCCGGT CGGGCTCATC TTCGTGCCCT TCTTCGACGA AGGCCGGCTG
GTGAACAAGC TCACGCTCGA CGCCACCTGC CCGATCTCGA AGGAGACCGA CTACAAGAAA
TGCGCGGTGA AGGTCCTTAA GGTCTGA
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| Protein sequence | MSMNRREFIK NNAIAAAAAT AGIGIPVVAE AQQPGAGGTK VRWDKAACRF CGTGCSVLVG
VQDGRVVATQ GDPDSPVNRG LNCIKGYFLS KIMYGEDRLT KPLLRMKNGQ FDKNGEFTPI
SWEQAFDIME QKWKKAIKEH GPDSVAMFGS GQWTVWEGYA ASKLMKAGFR TNNLDPNARH
CMASAVAGFM RTFGIDEPMG CYDDIENADT FVLWGSNMAE MHPILWSRIT DRRLSKQGCQ
VHVLSTFEHR SYELADNPMI FVPQTDLAIL NYICNYIIQN GKVNKAFVER NVKFKIGETD
IGFGLRPNHV LEAKATSNGY PGAEGKPKGD TGAAKDISFD EFARFVSEYT AEKVSKLSGV
PEDRLVKMAE QYADPNRKVV SFWTMGFNQH TRGTWVNNMI YNVHLLVGKI SEPGNSPFSL
TGQPSACGTA REVGTFAHRL PADMVVTNPM HRALTEELWK LPEGTIPPKI GLHAVAQSRA
LKDGKLKCYW TTTTNNMQAG PNVNDEIYPG WRNPEAFVVV SDVYPTVSAL SADLILPCAM
WAEKEGAFGN AERRTQFWRQ QVSAPGEAKS DLWQYIQFAK RFKVEEVWPE ELVAKKPEYR
GKTLYDVLYA NGQVNKFPLA DVEKANGHAI PGYMNDESKE LGFYLQKGLF EEYAAFGRGH
AHDLADFDVY HKARGLRWPV VDNKETLWRF REGYDPYVKA GEGVKFYGHK DNKAVVFALP
YQDPPEMPDA EFDMWLCTGR VLEHWHTGSM TRRVPELHRS VPEAQIFMHP EDAQKRGLQR
GMAVKVVSRR GEIVARLETR GRNKPPVGLI FVPFFDEGRL VNKLTLDATC PISKETDYKK
CAVKVLKV
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