| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3987 |
|---|
| Symbol | |
|---|
| ID | 7873633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4385489 |
|---|
| End bp | 4385932 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643700924 |
|---|
| Product | protein of unknown function DUF411 |
|---|
| Protein accession | YP_002890947 |
|---|
| Protein GI | 237654633 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3019] Predicted metal-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGA AAACTTTGCT CGGCGGGCTC GTGGCAAGCC TGATGATCGT GAGCGGCGCA
GCGTTTGCGC AGGGGCCCGT ACGCGTAGAG GTCTACAAGA GCGCTTATTG CGGGTGCTGC
GGGAAATGGG TCGAGCACCT GAGAAAGAAC GGCTTCGATG TCGTGACGAA AGACGTCGAT
GATGTCCCCG CAGCCCGCAA GGCACTGGGC ATGCCGGACC AATACGGCTC GTGTCACACG
GCCAAGGTAG GTTCCTACTC CGTCGAGGGG CACGTCCCTG CGGACGACAT CCGCCGGCTT
CTCGCCGAGT CCCCAAAGGC AATCGGACTG GCTACGCCAG GCATGCCGCA GGGGTCGCCC
GGCATGGAGA CCTCGACCCC GCAACCCTAT GAGACGCTTC TGGTCGGGCT TGACGGAAGC
GCGAGGGTTT TTGCCCGACA CTGA
|
|---|
| Protein sequence | MKTKTLLGGL VASLMIVSGA AFAQGPVRVE VYKSAYCGCC GKWVEHLRKN GFDVVTKDVD
DVPAARKALG MPDQYGSCHT AKVGSYSVEG HVPADDIRRL LAESPKAIGL ATPGMPQGSP
GMETSTPQPY ETLLVGLDGS ARVFARH
|
|---|
| |