Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3943 |
Symbol | |
ID | 7873589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 4338888 |
End bp | 4339469 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643700880 |
Product | HupE/UreJ protein |
Protein accession | YP_002890903 |
Protein GI | 237654589 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2370] Hydrogenase/urease accessory protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.788882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGATCC GCTTCCGCTC CGTGCTCGCC GCCAGTGCGC TCGCAAGCCT CTCGGGCGCC GCGCTCGCCC ACCCCGGGCA CGCACCCGCC AGCTTCGCCA GCGGCTTCGC CCATCCGCTC GGCGGGCTCG ACCACCTGCT CGCCATGCTC GCGGTCGGCC TCTACGCCGC ACGCCAGCCG GGCGCTGCAC GCCTGCTGCT GCCCACCGGC TTCGTGCTGG CGATGCTCGC CGGCGCCGGC CTCGGCGCGC TCGGCCTCGC CCTGCCCGCG GTCGAGGCCG GCATTTCCGC CTCGGTGCTG GTGCTGGGCC TGCTGATCGC ATTCGCCGCC CGCCTGCCGC TGGCGGCGAG CCTGCCCCTG GTCGCCGCCT TCGCGCTCTT CCACGGCCAT GCCCACCACG CCGAGATGGG CGACGCCACC CTGCTCGGCT ACAGCCTCGG CTTCGCACTC GCGACCGCGG CCCTGCACGC GGCCGGCCTG ACGCTCGCAC GCGCCTTCCC CGACAGCCGC GGCGGACGCC TTGCGCTGCG CCTGGGCGGC GGGGGAATCG CCGGCGTGGG CGTCGCCCTG CTCGGCGGCT GA
|
Protein sequence | MTIRFRSVLA ASALASLSGA ALAHPGHAPA SFASGFAHPL GGLDHLLAML AVGLYAARQP GAARLLLPTG FVLAMLAGAG LGALGLALPA VEAGISASVL VLGLLIAFAA RLPLAASLPL VAAFALFHGH AHHAEMGDAT LLGYSLGFAL ATAALHAAGL TLARAFPDSR GGRLALRLGG GGIAGVGVAL LGG
|
| |