Gene Tmz1t_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3942 
Symbol 
ID7873588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4338172 
End bp4338849 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID643700879 
Producturease accessory protein UreG 
Protein accessionYP_002890902 
Protein GI237654588 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.452121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGA TTTCTGCCCT CCACGCCGCG CATGCCCCCA CGACCGCCCG TGCACACGCC 
GGACCGCAGC GCGGCCCCCT GCGCGTCGGC ATCGGCGGCC CGGTCGGTTC GGGCAAGACC
GCGCTGACCC TGGCGATGTG CCTGGCCCTG CGCGACAAGT ACGACATCGC CGTGGTCACC
AACGACATCT ACACCGCCGA GGACGCCCAG TTCCTCGTGC GCAACGAGGC GCTCGCGCCC
GAGCGCATCA TCGGCGTGGA GACCGGCGGC TGCCCGCACA CCGCGATCCG CGAGGACGCC
TCGATCAACC TCGAGGCGGT CGAGCGCCTG AACGCGCGCT TCCCCGGGCT GGACATCGTC
TTCGTCGAAT CCGGCGGCGA CAACCTCGCC GCCACCTTCT CGCCCGAGCT CTCCGACCTG
ACGATCTACG TGATCGACGT CTCCGCCGGC GACAAGATCC CGCGCAAGGG CGGGCCGGGC
ATCACCCGCA GCGACCTGCT GGTGATCAAC AAGATCGACC TCGCGCCGCT GGTAGGCGCC
TCGCTCGAGG TCATGGACCG CGACGCGCGC AGGATGCGGG GAGATCGCCC CTTCCTGTTC
TCGAACCAGA AGACCGGACA GGGCCTGCGT GAGATCATCG ACTTCATCGA GCGCCAGGGC
ATGCTGGCCG CCGCCTGA
 
Protein sequence
MTPISALHAA HAPTTARAHA GPQRGPLRVG IGGPVGSGKT ALTLAMCLAL RDKYDIAVVT 
NDIYTAEDAQ FLVRNEALAP ERIIGVETGG CPHTAIREDA SINLEAVERL NARFPGLDIV
FVESGGDNLA ATFSPELSDL TIYVIDVSAG DKIPRKGGPG ITRSDLLVIN KIDLAPLVGA
SLEVMDRDAR RMRGDRPFLF SNQKTGQGLR EIIDFIERQG MLAAA