Gene Tmz1t_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3934 
Symbol 
ID7873580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4331694 
End bp4332560 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID643700871 
Producturea ABC transporter, ATP-binding protein UrtD 
Protein accessionYP_002890894 
Protein GI237654580 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID[TIGR03411] urea ABC transporter, ATP-binding protein UrtD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCCA CCCTCGAGAT CGAACGCGAG CGCACCCGCC TCGACGCCGA GCGCGAGAAC 
GAGCGCGAGC ACTGGGACGG CTCGGCCGCG GACGGGCGGG TGCTCCGGCC CGGAGAGCTC
GACCTGTCGC ACAAGGTCAT CCTCTACCTC GACGACATCA CCGTGAGCTT CGACGGCTTC
CGCGCGCTCA ACAAGCTCAG CCTGACCATC GACGCCGGCG AGCTGCGCTG CATCATCGGC
CCCAACGGCG CCGGCAAGAC CACCATGATG GACGTGATCA CCGGCAAGAC GCGGCCCGAC
TCGGGCACCG CCTTCTTCGG CCAGACCATC GACCTCACCC GCCTGACCGA ACCCGAGATC
GCCCACGCCG GCATCGGCCG CAAGTTCCAG AAGCCGACCA TCTTCGAGCA GCACACGGCC
TTCGAGAACC TCGAGCTGGC CATGAAGGCC GACAAGCGCG TGCGCCGCAC CCTGTTCGCC
AGCCTCATCG ACGACGAGCG CGACCGCGTC GCCGCGGTGC TGCGCCAGAT CCGCCTCGAC
CAGGCCGCCG ACCGCCCCGC CGGGCTGCTC TCGCACGGCC AGAAGCAGTG GCTGGAGATC
GGCATGCTGC TGATGCAGGA GCCACGCCTG CTGCTGCTCG ACGAGCCGGT CGCCGGCATG
ACCGACGACG AGACCGAGCG CACCGCCGAG CTGTTCACGA GCCTCGCCGG CAAGCACTCG
CTGGTGGTGG TCGAGCACGA CATGGCCTTC GTCGAGGCGC TCGGCGGCAA GGTCACGGTG
CTGTGCGAGG GTTCGGTGCT GGCCGAGGGG GATCTCGCCA CGGTGCAGGC GGATCCGCGC
GTGATCGAGG TCTACCTGGG GCGCTGA
 
Protein sequence
MIPTLEIERE RTRLDAEREN EREHWDGSAA DGRVLRPGEL DLSHKVILYL DDITVSFDGF 
RALNKLSLTI DAGELRCIIG PNGAGKTTMM DVITGKTRPD SGTAFFGQTI DLTRLTEPEI
AHAGIGRKFQ KPTIFEQHTA FENLELAMKA DKRVRRTLFA SLIDDERDRV AAVLRQIRLD
QAADRPAGLL SHGQKQWLEI GMLLMQEPRL LLLDEPVAGM TDDETERTAE LFTSLAGKHS
LVVVEHDMAF VEALGGKVTV LCEGSVLAEG DLATVQADPR VIEVYLGR