| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3931 |
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| Symbol | |
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| ID | 7873577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 4327373 |
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| End bp | 4328626 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643700868 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_002890891 |
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| Protein GI | 237654577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.606906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTC GCAACTTCGT CAAAGCCCTC ACGCTTTCGG CTTCCATCGC CGCGATCGGC
CTGCCCGCCG GCGCGCACGC CGCCGACACC ATCAAGGTCG GCATCCTGCA TTCGCTGTCG
GGCACGATGG CGATCTCCGA GACCGCGCTC AAGAACGTGG CGCTGATGAC CATCGAGGAG
ATCAACGCCG GCGGCGGCGT GCTCGGCAGG AAGCTCGAGC CGGTGGTGGT CGACCCGGCC
TCGAACTGGC CGCTGTTCGC CGAGCGCGCG CGCCAGCTGC TGGCGCAGGA CAAGGTCGCG
GCGGTGTTCG GCTGCTGGAC CTCGGTGTCG CGCAAGTCGG TGCTGCCGGT GTTCAAGGAG
TTGAACGGCC TGCTCTTCTA CCCGGTGCAG TACGAGGGCG AGGAGCTCGA GAAGAACGTC
TTCTACACCG GCGCCGCGCC CAACCAGCAG GCGATTCCCG CGGTCGAGTA CCTGATGAGC
GAGGAAGGCG GCGGCGCGAA GCGCTTCGTG CTGCTCGGCA CCGACTACGT GTATCCGCGC
ACGACCAACA AGATCCTGCG CGCCTTCCTG AAGAGCAAGG GGGTGAGCGA TGCGGACATC
CTGGAGGACT ACACGCCCTT CGGCCACGCC GACTACCAGA CCATCATCGC GCGCATCAAG
CAGTTCGCCT CCGAGGGCAA GAAGACGGCC GTGGTGTCGA CCATCAACGG CGACTCCAAC
GTGCCCTTCT ACAAGGAACT GGGCAACGCC GGACTGAAGG CGACGGACGT GCCGGTGGTG
GCCTTCTCCG TCGGTGAGGA GGAGCTGCGC GGCGTCGACA CCAAGCCCCT GCTCGGCCAC
CTCGCGGCGT GGAACTACTT CATGTCGGTC GACAACCCGC AGAACAAGGC CTTCATCGAC
AAGTACCGCG CGTGGGCGAA GAAGAACGGC GTGCCCAACG CCGACACCGT GGTCACCAAC
GACCCGATGG AGGCCACCTA CGTCGGCCTG CACATGTGGA AGCAGGCGGT CGAGAAGGCC
GCCAGCACGG ACGTCGACAA GGTCATCGCG GCGATGGGCG GGCAGAGCTT CAAGGCGCCG
TCGGGCTTCA CGCTGACCAT GGACGCGACC AATCACCACC TGCACAAGCC GGTGCTGATC
GGCGAGGTGC GCGCGGACGG CCAGTTCGAC GTGGTATGGC AGACCAAGGG GCCGATCCGC
GCCCAGCCGT GGAGCCCGTT CATCGAGGGC AACGAGGGCA AGCAGGGGCT GTGA
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| Protein sequence | MNRRNFVKAL TLSASIAAIG LPAGAHAADT IKVGILHSLS GTMAISETAL KNVALMTIEE
INAGGGVLGR KLEPVVVDPA SNWPLFAERA RQLLAQDKVA AVFGCWTSVS RKSVLPVFKE
LNGLLFYPVQ YEGEELEKNV FYTGAAPNQQ AIPAVEYLMS EEGGGAKRFV LLGTDYVYPR
TTNKILRAFL KSKGVSDADI LEDYTPFGHA DYQTIIARIK QFASEGKKTA VVSTINGDSN
VPFYKELGNA GLKATDVPVV AFSVGEEELR GVDTKPLLGH LAAWNYFMSV DNPQNKAFID
KYRAWAKKNG VPNADTVVTN DPMEATYVGL HMWKQAVEKA ASTDVDKVIA AMGGQSFKAP
SGFTLTMDAT NHHLHKPVLI GEVRADGQFD VVWQTKGPIR AQPWSPFIEG NEGKQGL
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