Gene Tmz1t_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3930 
Symbol 
ID7873576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4325770 
End bp4326573 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID643700867 
ProductABC transporter related 
Protein accessionYP_002890890 
Protein GI237654576 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCTA TGACTGAGGC CGCCGCGATG ACGGGGCCGA TGACGAGCCC GATGATCCTC 
GCCGACGGCA TCCGCAAGCG CTTCGGCGCC AACGAGGTGC TCAAGGGCGT GTCGCTGACG
CTCGCCAAGG GCGAGGTGGT GGCGGTGATC GGGCCCTCGG GCTCGGGCAA GAGCACCTTC
CTGCGCTGCC TCAACCATCT GGAAACGATC GACGCCGGGC GCATCGTCAT CGAGGGCGAC
GTCCTCGCCG ACAACGACAC CGGCGGCCGC GCCCGCTACG TCGCCGACGC CGAGGTGCGC
CGGATCTGTG CGCGCATGGG CATGGTGTTC CAGCACTTCA ACCTGTTCCC CCACCTCACC
GTGCTGGAGA ACGTGATCGA GGCCCCGATC ACGGTGAAGG GCCTGAAGCG CGAGGCCATC
CTGCCCAAGG CCGAAGCGCT GCTGCGCAAG GTCGGCCTCT TCGACAAGCG CGACGCCTAC
CCCTCGCGCC TGTCCGGCGG ACAGAAGCAG CGCGTGGCGA TCGCGCGTGC GCTGGCAATG
GAGCCCGACA TCATGCTCTT CGACGAGCCC ACCTCGGCGC TCGACCCCGA GCTCACCGGC
GAGGTGCTGC GCACCATGCG CCAGCTCGCC GACGAGCACA TGACCATGCT GGTGGTGACG
CACGAGATGG GCTTCGCCCG CGAGGTCGCC AGCCGGGTGG TGTTCATGGA CGGCGGCGAG
CTCATCGAGT CGCGCCCCGC GGCCGAGTTC TTCGCCAACC CGCAGCATCC ACGCACACGC
GCCTTCCTCG ACAGCATGCT GTAG
 
Protein sequence
MPSMTEAAAM TGPMTSPMIL ADGIRKRFGA NEVLKGVSLT LAKGEVVAVI GPSGSGKSTF 
LRCLNHLETI DAGRIVIEGD VLADNDTGGR ARYVADAEVR RICARMGMVF QHFNLFPHLT
VLENVIEAPI TVKGLKREAI LPKAEALLRK VGLFDKRDAY PSRLSGGQKQ RVAIARALAM
EPDIMLFDEP TSALDPELTG EVLRTMRQLA DEHMTMLVVT HEMGFAREVA SRVVFMDGGE
LIESRPAAEF FANPQHPRTR AFLDSML