Gene Tmz1t_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3924 
Symbol 
ID7873570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp4320508 
End bp4320774 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content74% 
IMG OID643700861 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_002890884 
Protein GI237654570 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.377852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCTCG CCATCCCCGC CCGCATCGTC GAACTGCTCG CCGGCGACCA ATGCCGCGTC 
GAGCTCGGCG GCGTGCGCAA GGAGATCTCG CTCGCCCTGG TCGACGGCGC CGCCGTCGGC
GACTACGTGA TCGTGCACGT CGGCTATGCG CTGACCCGGC TCGACCCCGA AGAGGCCGCA
CAGACCCTGG CGCTGATCGC CGACGCCGGC ATCGACCCCG CGCGCGCGCT CGGCGGCGAG
CACCCCGCAC CCGGTGCGGC GCGCTGA
 
Protein sequence
MCLAIPARIV ELLAGDQCRV ELGGVRKEIS LALVDGAAVG DYVIVHVGYA LTRLDPEEAA 
QTLALIADAG IDPARALGGE HPAPGAAR