Gene Tmz1t_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3922 
Symbol 
ID7873568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp4318197 
End bp4319165 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID643700859 
Producthydrogenase accessory protein HypB 
Protein accessionYP_002890882 
Protein GI237654568 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.320935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCACGA CATGTGGTTG CGGCAGCGGT GAAACCCGGA TCGGCGCGCT CGGTGGCGGG 
CGCCCCGCGG GTGGCGCACA CCCGCGGCCC GGCGCGACGC GCACATGGCG TGCCGTCGGC 
GGGCACGCTG CCACCCCGCC CCGCGGCTTG TCGCCCGACA CGTCGTCATT CTCGCCCGTT 
ACCGCCGCGG ACACGACGCC CACCTCGCAC CCCGCCGCGC CCGGCCACCA CCATCTCGAC 
TTCGGCAGCG GTCCGGCGCA CGCCCACGCG CCCGGCCTCA GCCAGGCGCA GATGGTGAAG 
ATCGAGCGCG ACATCCTCGG CAAGAACGAC GCGCGCGCCG CGGAGAACCG CGCCTGGCTG 
GCCGAGCGCG GCATCTTCGC GCTCAACCTC GTGTCCAGCC CGGGTTCGGG CAAGACCTCG 
CTGCTGGTGC GAACCCTGCA GCTGCTCGGC GGGCGCGTGC CCGCCGCGGT GATCGAGGGC 
GACCAGCAGA CCGAATTCGA CGCCGAGCGC ATACGCGCCA CCGGCGTGCC GGCGCTGCAG 
ATCAACACCG GCAAGGGCTG CCACCTCGAC GCCGACATGG TCGCGCGCGC GCTGCCGCGC 
ATGGAGCTCG CCGCGGACAG CCTGCTGCTG ATCGAGAACG TCGGCAACCT GGTGTGTCCG 
GCCGCGTTCG ACCTCGGCGA GGCGCACAAG GTGGCGATCT TCTCGGTCAC CGAGGGCGAG 
GACAAGCCGC TCAAGTATCC CGACATGTTC GCCGCCGCCG ACCTGATGCT GCTCAACAAG 
ACCGACCTGC TGCCCTACCT CGCCTTCGAC ACCGAACGCG CGATCGACTT CGCGCTGCGG 
GTGAATCCGC GCCTGCGCGT GGTCCGGACT TCAGCCACCA ACGGCGAGGG CCTGGACGAA 
TGGATCGCCT GGATCGAGGC CGGACTCGCC GCCGCGCGTG CACGGCGTGC CGCAGGCCTG 
CGGGCATGA
 
Protein sequence
MCTTCGCGSG ETRIGALGGG RPAGGAHPRP GATRTWRAVG GHAATPPRGL SPDTSSFSPV 
TAADTTPTSH PAAPGHHHLD FGSGPAHAHA PGLSQAQMVK IERDILGKND ARAAENRAWL 
AERGIFALNL VSSPGSGKTS LLVRTLQLLG GRVPAAVIEG DQQTEFDAER IRATGVPALQ 
INTGKGCHLD ADMVARALPR MELAADSLLL IENVGNLVCP AAFDLGEAHK VAIFSVTEGE 
DKPLKYPDMF AAADLMLLNK TDLLPYLAFD TERAIDFALR VNPRLRVVRT SATNGEGLDE 
WIAWIEAGLA AARARRAAGL RA