Gene Tmz1t_3916 details

Gene Information

• Locus tag: Tmz1t_3916
• ID: 7873562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4313151
• End bp: 4313759
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643700853
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_002890876
• Protein GI: 237654562
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTCCG GCATCGTCGC GGCCGTCGGC CGCATCGAAC ACGTCGAGGC GCTCGCGGAC 
GGCGTGCGCA TCACCGTGGA CACCAACGGC CTCGACCTCT CCGACGTGAT CGTCGGCGAC 
AGCGTGGCGC ACAGCGGCGT GTGCCTCACC GTGGTCGAGA TGGACGGCCC GCGGCTGCGC 
TACGACGTCT CGCGCGAGAC GCTCAACTGC ACCGTGGGGC TGGACGCCGT CGGCGGCGAG 
GTCAACCTCG AGAAGTCGCT GCGCCTGGCC GACCGCCTCG GCGGCCATCT CGTCACCGGC 
CATGTGGATA GCGTCGGCGA GGTGGTGAAG TTCGCGCCGA TCGGCGAGAG CCACGAGCTG 
GTGATCCGCG CCCCGGCGGC GATCGCCGGC TACATCGCGA AGAAGGGCTC GGTCACCGTC 
AATGGCGTCA GCCTCACGGT CAATCGCGTC GAGGGCCGCG ACTTCTGGAT CAACCTGATC 
CCGCACACGG TCGCGGTCAC CAACCTCAAG CACCTCGCGC CGGGCAGCAA GGTCAATCTC 
GAGATCGACC TCATCGCACG CTACGTCGAG CGCATGCTCG AGTGGAAGAA CGACGCCGCG 
CAGGCCTGA 

 

Protein sequence

MFSGIVAAVG RIEHVEALAD GVRITVDTNG LDLSDVIVGD SVAHSGVCLT VVEMDGPRLR 
YDVSRETLNC TVGLDAVGGE VNLEKSLRLA DRLGGHLVTG HVDSVGEVVK FAPIGESHEL 
VIRAPAAIAG YIAKKGSVTV NGVSLTVNRV EGRDFWINLI PHTVAVTNLK HLAPGSKVNL 
EIDLIARYVE RMLEWKNDAA QA