Gene Tmz1t_3915 details

Gene Information

• Locus tag: Tmz1t_3915
• ID: 7873561
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 4311251
• End bp: 4313092
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643700852
• Product: cytochrome c biogenesis protein transmembrane region
• Protein accession: YP_002890875
• Protein GI: 237654561
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4232] Thiol:disulfide interchange protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACCGCC TTTTCCTCCT GCTCGCCCTG ATCGCGAGCC TGCTCCTGCC CGCCGCCGCG 
CGCGCCAACC CGATCGAGCC CGAGAAGGCC TTCGCGATGC GCGCGCAGGC GCTCGACGCG 
CAGACCATCG AGGTGGTGTT CGAGATCGCC AAGGACTACT ACCTCTACGG CGACAAGTTC 
CGCTTCGAGG CCGAGCCCGC CGGCGTGGGC TTCGGCGCGA TGGAAAAGCC CGCGGGCAAG 
AAGCACAAGG ACGACTTCTT CGGCGAGGTC GAGACCCACC GCGGCGAGCT GCGCATCCTG 
GTCCCGGTAC AGGCGCCCGC CGGCACCACC CGCTTCGAGC TCTTCGCCAC CAGCCAGGGC 
TGCTGGGATG GCGGCATCTG CTATCCGCCC ACCACGCAGC AGGCCTCGAT CGACCTCGCC 
GCGCCGCCGA AGAAGGCGGG CGGCTTCCTC GACAGCGTGC TCGGCGGCCG CGCGGGCACC 
GGCAGCGCCG CTTCGCCCAC CCCGGTCGCG CTTGCCGCGC CGGAGGACGG CAGCGGCGGC 
GGCGCCGTCT CCAGCGACGA GAGCGGCGAC ATCGCCCGCC TGCTTTCCGG CGCCAGCGTG 
CCGATCATCC TGCTGAGCTT CTTCGGCTTT GGCCTGCTGC TCGCCTTCAC GCCCTGCACC 
TTCCCGATGA TCCCGATCCT GTCGGGCATC ATCGTCGGCC AGGGCAACAA GGTCTCGCAC 
ACGCGCGCCT TCGTGCTCTC GCTCGCCTAC GTGCTGGGCA TGGCGGTGAC CTACGCGCTC 
GCCGGGGTCG CCGCCGGCAT GACCGGCACC ATGCTGTCGG CAGCGCTGCA GAACGTGTGG 
GTGCTGTCGG CCTTCGCGCT GATGTTCGTG CTGCTGTCGC TGTCGATGTT CGGCTTCTAC 
GAGCTGCAGC TGCCCAGCAC GCTGCAGAGC AAGCTGGCCG ACACCGCCAG TCATGGCAAG 
GGCGGCCACC TCGGCGGCGT CACCCTGATG GGCGTGCTGT CGGCCCTCAT CGTCGGCCCC 
TGCGTGGCGG CCCCGCTCGC CGGCGCCCTG CTCTACATCG CGCAGACCGG CGACGCCGTG 
CTCGGCGGCT GGGCGCTGTT CGCGATGGGC TTGGGCATGG GCGCGCCGCT GCTGGCGGTG 
GGCGTGGCCT CGCGCAGCCT GCTGCCCAAG GTCGGGCCGT GGATGGAAGG CGTCAAGAAG 
GCCTTCGGCG TGATGCTGCT CGCGGTTGCG CTGTGGATGA TCACCCCGGT GATCCCGCCC 
CTGGCCACCA TGCTGGGCTG GGCCGCGCTG CTGCTGTTCT CGGCGATCTT CCTGCACGCG 
ATCGACCCGC TGCCGCCGCA GGCCAGGGGC TGGCAGCGCT TCTGGAAGGG CGTGGGCGTG 
GTGCTGTTGT TGGCCGGCGC GGCGATCCTG GTGGGCGCGC TCGCCGGCTC GCGCGACCCG 
CTGCAGCCCT TGTCGGTGCT GCGCGCGCAG GCCGCGGCGC CGGTCGATGT GCCGCAGTTC 
GAGAAGGTGG ACTCCATCGC CGAACTCGAG GCCCGGCTCG CCACCACCGA TCGCCCGGTG 
CTGCTCGACT TCTATGCCGA CTGGTGCGTG TCGTGCAAGG AGATGGAGCG CTTCACCTTC 
AGCGACGCCG CGGTCGCCGC GCGCATGAGC CGCATGCTGC TGCTGAAGGC CGACGTCACC 
GCCAACACCG ACGAGCACAA GGCGCTGCTC AAGCGCTTCG GCCTCTTCGG GCCGCCGGGC 
ATCCTCTTCT TCGACGCTGC GGGCAAGGAA CGCGAGGGCC TGCGCGTGGT GGGCTTCATG 
AAGGCGGCGC CGTTCGCGAC GGTGCTGGAC CGGGCGCTCT GA 

 

Protein sequence

MHRLFLLLAL IASLLLPAAA RANPIEPEKA FAMRAQALDA QTIEVVFEIA KDYYLYGDKF 
RFEAEPAGVG FGAMEKPAGK KHKDDFFGEV ETHRGELRIL VPVQAPAGTT RFELFATSQG 
CWDGGICYPP TTQQASIDLA APPKKAGGFL DSVLGGRAGT GSAASPTPVA LAAPEDGSGG 
GAVSSDESGD IARLLSGASV PIILLSFFGF GLLLAFTPCT FPMIPILSGI IVGQGNKVSH 
TRAFVLSLAY VLGMAVTYAL AGVAAGMTGT MLSAALQNVW VLSAFALMFV LLSLSMFGFY 
ELQLPSTLQS KLADTASHGK GGHLGGVTLM GVLSALIVGP CVAAPLAGAL LYIAQTGDAV 
LGGWALFAMG LGMGAPLLAV GVASRSLLPK VGPWMEGVKK AFGVMLLAVA LWMITPVIPP 
LATMLGWAAL LLFSAIFLHA IDPLPPQARG WQRFWKGVGV VLLLAGAAIL VGALAGSRDP 
LQPLSVLRAQ AAAPVDVPQF EKVDSIAELE ARLATTDRPV LLDFYADWCV SCKEMERFTF 
SDAAVAARMS RMLLLKADVT ANTDEHKALL KRFGLFGPPG ILFFDAAGKE REGLRVVGFM 
KAAPFATVLD RAL