| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3905 |
|---|
| Symbol | |
|---|
| ID | 7873553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4303764 |
|---|
| End bp | 4304144 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643700844 |
|---|
| Product | putative transcription regulator with HTH domain |
|---|
| Protein accession | YP_002890867 |
|---|
| Protein GI | 237654553 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTGA AGCCCATCCG CACCGATTCC GAGCACGCCG AAGCACTGGC TGAGGTCGAG
CGCCTGTGGG ACGTGCCCAC AGGCAGCGCC GAGTCCGATC GGCTGGAAGT GCTCGCCATG
CTGGTGGAAG CGTACGAGAC TGCGCGCTTT CCCATCGAAG CGCCCGACCC GATCGAATTC
CTCGAGTACG TCATGGATTC ACGCGGGCTG ACCCGGAAAG ACCTGGAACC GTATATCGGT
CCGCGCGGCC GCGTGGCCGA CATCATGAAC AGGGCGCGCC CCTTGTCCAT CGGGATGATC
CGCCGCCTGT CCTCCGGCCT CGGCCTGCCT GCCGACGTAC TGATCCAGCC CTACCCGCTG
CGCGAAGTCG CCGCAGCCTG A
|
|---|
| Protein sequence | MELKPIRTDS EHAEALAEVE RLWDVPTGSA ESDRLEVLAM LVEAYETARF PIEAPDPIEF
LEYVMDSRGL TRKDLEPYIG PRGRVADIMN RARPLSIGMI RRLSSGLGLP ADVLIQPYPL
REVAAA
|
|---|
| |