Gene Tmz1t_3888 details

Gene Information

• Locus tag: Tmz1t_3888
• ID: 7873539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 4287195
• End bp: 4287623
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643700830
• Product: protein of unknown function DUF132
• Protein accession: YP_002890853
• Protein GI: 237654539
• COG category: [R] General function prediction only
• COG ID: [COG1569] Predicted nucleic acid-binding protein, contains PIN domain
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTGC CGCGCGTCGT GCTCGACACC CACTGCCTGG TGTCGGCGCT GATCTTTTCT 
CGCAGCCGGT TTGCATGGCT GCGTGAGGCC TGGCAGGGCG GGCGCTGTGT CCCCCTGGCC 
AGTCATGACA CGGTCAGCGA GCTCTTGCGG GTGCTGAATT ACCCGAAGTT CAAGCTCGGG 
CGTGATGAGC AGGAGGCGCT GCTGGCGGAG TTCCTGCCGT ATGTCGAGAC CGTCCGGATC 
GAGGCCCCGC CCGATGGGCT GCCGGGCATT CGGGATCCCG ACGACCTCAT CTTTCTGGTG 
CTCGCGGTCG TCGCCGAGGC CGATGTCCTT GTCAGTGGCG ATGGCGACCT GCATGCGGTC 
AAAGCGGAAT TCAAGGTTCC GATCCTGACG GTGGCGGAGT TTTCGGAGTG GTTGCAGGGG 
CGGGGTTAG 

 

Protein sequence

MTLPRVVLDT HCLVSALIFS RSRFAWLREA WQGGRCVPLA SHDTVSELLR VLNYPKFKLG 
RDEQEALLAE FLPYVETVRI EAPPDGLPGI RDPDDLIFLV LAVVAEADVL VSGDGDLHAV 
KAEFKVPILT VAEFSEWLQG RG