| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3876 |
|---|
| Symbol | |
|---|
| ID | 7873527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 4273343 |
|---|
| End bp | 4274773 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643700818 |
|---|
| Product | protein of unknown function DUF404 |
|---|
| Protein accession | YP_002890841 |
|---|
| Protein GI | 237654527 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CCAAGCCTTT CGATGAGATG CACGCCGCCG ACGGCACGAT CCGGACGCAC
TACCAGCCCT ACAGCGAGTG GCTCGGGCAC ACCCCGCGCG AGCTGATCGC GCGCAAGCGC
AAGGAGGCCG ATCTCGCCTT CCACCGCGTC GGCATCACCT TCAACGTCTA TGGCGCCGAC
GGCGGCAAGG AGCGCCTGAT CCCCTTCGAC CTGCTGCCGC GCATCATCCC CGGCGACGAA
TGGCGCACGC TCGAGGCCGG CCTGCGCCAG CGCGTGCGCG CGCTCAACGC CTTCCTCGCC
GACATCTACC ACGGCCAGGA GATCCTGCGC GCCGGACGCA TCCCCGCCGA CCAGGTGCTG
GACAACGCCC AGTTCCGCCC CGAGATGAAG GGTGTGCACG TGCCCGGCGG GCTGTACGCG
ATGATCGCCG GCATCGACCT GGTGCGTGCC GCGGGTGCCG ACGGCAAGGG CGACTACTAC
GTGCTGGAGG ACAACCTGCG CGTGCCCTCG GGGGTGAGCT ACCTGCTGGA GAACCGCAAG
ATGATGATGC GGCTCTTCCC CGACCTGTTC TCGCGCTACG ACGTGCAGCC GGTCGAGCAC
TACCCCGACC TGCTGCTCGA GACCCTGCGC GCGGTGGCGC CGGCCGGCGT ACTCGACCCC
ACCGCGGTGC TGCTCACCCC GGGCGCCTTC AACAGCGCCT ACTTCGAGCA CAGCTTCCTC
GCCCAGCAGA TGGGCATCGA GCTCGTCGAG GGCCAGGACC TCTTCGTCGA GGACGACACC
GTGTTCATGC GCACCACCCA GGGGCCGCGG CGGGTGGATG TGATCTACCG GCGGCTGGAC
GACGACTTCC TCGACCCCGA GGTCTTCCGC GCCGACTCGA TGCTCGGTGT GCCGGGCCTG
ATGTCGGCCT ACCGCGCCGG CCGGGTGACG CTGGCCAATG CGGTCGGCAC GGGGGTGGCG
GACGACAAGT CGATCTACCC CTACGTGCCC GAGATGGTGC GCTTCTACCT CGGCGAGGAG
CCGATCCTCA ACAACGTCCC GACCTGGATG CTGCGCGAAC CCGACGACCT CGCCTACACG
CTCGCCCACC TGCCCGAGCT GGTGGTCAAG GAGGTCCATG GCGCCGGCGG CTACGGCATG
CTGGTGGGGC CGGCGGCCAC CAAGGCCGAG ATCGAGGAGT TCCGCCAGCG CATCCTCGCC
GCGCCGGAGA AGTACATCGC CCAGCCGACC TTGTCCTTGT CCACCTGCCC GACCTTCGTC
GACGCCGGCA TCGCGCCGCG CCACATCGAC CTGCGACCCT TCGTGCTCTC GGGCGGACGC
GAGATCCGCA TGGTGCCGGG CGGCCTCACC CGCGTCGCGC TCAAGGCCGG CTCGCTGGTG
GTCAACTCCT CGCAGGGCGG GGGCACCAAG GACACCTGGG TGGTGGGCTG A
|
|---|
| Protein sequence | MNAAKPFDEM HAADGTIRTH YQPYSEWLGH TPRELIARKR KEADLAFHRV GITFNVYGAD
GGKERLIPFD LLPRIIPGDE WRTLEAGLRQ RVRALNAFLA DIYHGQEILR AGRIPADQVL
DNAQFRPEMK GVHVPGGLYA MIAGIDLVRA AGADGKGDYY VLEDNLRVPS GVSYLLENRK
MMMRLFPDLF SRYDVQPVEH YPDLLLETLR AVAPAGVLDP TAVLLTPGAF NSAYFEHSFL
AQQMGIELVE GQDLFVEDDT VFMRTTQGPR RVDVIYRRLD DDFLDPEVFR ADSMLGVPGL
MSAYRAGRVT LANAVGTGVA DDKSIYPYVP EMVRFYLGEE PILNNVPTWM LREPDDLAYT
LAHLPELVVK EVHGAGGYGM LVGPAATKAE IEEFRQRILA APEKYIAQPT LSLSTCPTFV
DAGIAPRHID LRPFVLSGGR EIRMVPGGLT RVALKAGSLV VNSSQGGGTK DTWVVG
|
|---|
| |